Analysis of interatomic Contacts of Structural Units in PDB entry:
1R0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1R0Z entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 11 chains in PDB entry 1R0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 390HIS 421
A
 SER 423ARG 658
A
 ILE 661PHE 669
B
 THR 389HIS 421
B
 SER 423ARG 658
B
 ILE 661PHE 669
C
 SER 388HIS 421
C
 SER 423ARG 658
C
 ILE 661PHE 669
D
 THR 390ARG 658
D
 ILE 661PHE 669
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 1R0Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
404 412Right-handed alpha
Helix 2
2
A
422 426Right-handed 310
Helix 3
3
A
429 437Right-handed alpha
Helix 4
4
A
463 472Right-handed alpha
Helix 5
5
A
501 507Right-handed alpha
Helix 6
6
A
513 524Right-handed alpha
Helix 7
7
A
526 531Right-handed alpha
Helix 8
8
A
535 539Right-handed 310
Helix 9
9
A
549 564Right-handed alpha
Helix 10
10
A
579 590Right-handed alpha
Helix 11
11
A
606 613Right-handed alpha
Helix 12
12
A
629 637Right-handed alpha
Helix 13
13
A
637 646Right-handed alpha
Helix 14
14
A
649 653Right-handed 310
Helix 15
15
A
654 669Right-handed alpha
Helix 16
16
B
404 410Right-handed alpha
Helix 17
17
B
429 437Right-handed alpha
Helix 18
18
B
463 472Right-handed alpha
Helix 19
19
B
501 507Right-handed alpha
Helix 20
20
B
513 524Right-handed alpha
Helix 21
21
B
526 531Right-handed alpha
Helix 22
22
B
535 539Right-handed 310
Helix 23
23
B
549 564Right-handed alpha
Helix 24
24
B
579 590Right-handed alpha
Helix 25
25
B
606 613Right-handed alpha
Helix 26
26
B
629 637Right-handed alpha
Helix 27
27
B
637 647Right-handed alpha
Helix 28
28
B
649 653Right-handed 310
Helix 29
29
B
654 669Right-handed alpha
Helix 30
30
C
404 411Right-handed alpha
Helix 31
31
C
422 426Right-handed 310
Helix 32
32
C
429 436Right-handed alpha
Helix 33
33
C
463 472Right-handed alpha
Helix 34
34
C
502 507Right-handed alpha
Helix 35
35
C
513 524Right-handed alpha
Helix 36
36
C
526 531Right-handed alpha
Helix 37
37
C
535 538Right-handed 310
Helix 38
38
C
549 564Right-handed alpha
Helix 39
39
C
579 590Right-handed alpha
Helix 40
40
C
606 612Right-handed alpha
Helix 41
41
C
629 637Right-handed alpha
Helix 42
42
C
637 647Right-handed alpha
Helix 43
43
C
649 653Right-handed 310
Helix 44
44
C
654 669Right-handed alpha
Helix 45
45
D
430 436Right-handed alpha
Helix 46
46
D
463 472Right-handed alpha
Helix 47
47
D
502 507Right-handed alpha
Helix 48
48
D
513 524Right-handed alpha
Helix 49
49
D
526 531Right-handed alpha
Helix 50
50
D
535 538Right-handed 310
Helix 51
51
D
542 546Right-handed 310
Helix 52
52
D
549 564Right-handed alpha
Helix 53
53
D
579 590Right-handed alpha
Helix 54
54
D
606 613Right-handed alpha
Helix 55
55
D
629 637Right-handed alpha
Helix 56
56
D
637 647Right-handed alpha
Helix 57
57
D
649 653Right-handed 310
Helix 58
58
D
654 668Right-handed alpha
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There are 10 sheets in PDB entry 1R0Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 448first strand
Strand 2
A
392 400anti-parallel
Strand 3
A
479 483anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
488 491first strand
Strand 2
A
568 572parallel
Strand 3
A
599 603parallel
Strand 4
A
453 458parallel
Strand 5
A
615 620parallel
Strand 6
A
623 628anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 448first strand
Strand 2
B
392 400anti-parallel
Strand 3
B
479 483anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
488 491first strand
Strand 2
B
568 572parallel
Strand 3
B
599 603parallel
Strand 4
B
453 458parallel
Strand 5
B
615 620parallel
Strand 6
B
623 628anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
439 448first strand
Strand 2
C
392 400anti-parallel
Strand 3
C
479 483anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
488 491first strand
Strand 2
C
568 572parallel
Strand 3
C
599 603parallel
Strand 4
C
453 458parallel
Strand 5
C
615 620parallel
Strand 6
C
623 628anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
500 501first strand
Strand 2
C
540 541anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
439 448first strand
Strand 2
D
392 400anti-parallel
Strand 3
D
479 484anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
488 491first strand
Strand 2
D
568 572parallel
Strand 3
D
599 603parallel
Strand 4
D
453 458parallel
Strand 5
D
615 620parallel
Strand 6
D
623 628anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
500 501first strand
Strand 2
D
540 541anti-parallel
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