Analysis of interatomic Contacts of Structural Units in PDB entry:
1R10


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1R10 entry

There are 2 chains in PDB entry 1R10 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 391SER 670
B
 GLY 391SER 670
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1R10. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
404 412Right-handed alpha
Helix 2
2
A
429 437Right-handed alpha
Helix 3
3
A
463 472Right-handed alpha
Helix 4
4
A
502 507Right-handed alpha
Helix 5
5
A
513 524Right-handed alpha
Helix 6
6
A
526 531Right-handed alpha
Helix 7
7
A
535 538Right-handed 310
Helix 8
8
A
549 564Right-handed alpha
Helix 9
9
A
579 590Right-handed alpha
Helix 10
10
A
606 612Right-handed alpha
Helix 11
11
A
629 637Right-handed alpha
Helix 12
12
A
637 646Right-handed alpha
Helix 13
13
A
649 653Right-handed 310
Helix 14
14
A
654 669Right-handed alpha
Helix 15
15
B
404 411Right-handed alpha
Helix 16
16
B
429 437Right-handed alpha
Helix 17
17
B
463 472Right-handed alpha
Helix 18
18
B
502 507Right-handed alpha
Helix 19
19
B
513 524Right-handed alpha
Helix 20
20
B
526 531Right-handed alpha
Helix 21
21
B
535 538Right-handed 310
Helix 22
22
B
549 563Right-handed alpha
Helix 23
23
B
579 591Right-handed alpha
Helix 24
24
B
606 612Right-handed alpha
Helix 25
25
B
629 637Right-handed alpha
Helix 26
26
B
637 646Right-handed alpha
Helix 27
27
B
649 653Right-handed 310
Helix 28
28
B
654 669Right-handed alpha
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There are 6 sheets in PDB entry 1R10. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
439 448first strand
Strand 2
A
392 400anti-parallel
Strand 3
A
477 484anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
488 491first strand
Strand 2
A
568 572parallel
Strand 3
A
599 603parallel
Strand 4
A
453 458parallel
Strand 5
A
615 620parallel
Strand 6
A
623 628anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
500 501first strand
Strand 2
A
540 541anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
439 448first strand
Strand 2
B
392 400anti-parallel
Strand 3
B
477 483anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
488 491first strand
Strand 2
B
568 572parallel
Strand 3
B
599 603parallel
Strand 4
B
453 458parallel
Strand 5
B
615 620parallel
Strand 6
B
623 628anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
500 501first strand
Strand 2
B
540 541anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il