Analysis of interatomic Contacts of Structural Units in PDB entry:
1R6V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1R6V entry

There is 1 chain in PDB entry 1R6V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9GLN 679
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1R6V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 60Right-handed alpha
Helix 2
2
A
68 70Right-handed 310
Helix 3
3
A
81 90Right-handed alpha
Helix 4
4
A
139 142Right-handed 310
Helix 5
5
A
143 149Right-handed alpha
Helix 6
6
A
152 159Right-handed alpha
Helix 7
7
A
177 181Right-handed 310
Helix 8
8
A
190 193Right-handed 310
Helix 9
9
A
207 218Right-handed alpha
Helix 10
10
A
242 247Right-handed alpha
Helix 11
11
A
253 267Right-handed alpha
Helix 12
12
A
282 295Right-handed alpha
Helix 13
13
A
387 406Right-handed alpha
Helix 14
14
A
410 422Right-handed alpha
Helix 15
15
A
440 447Right-handed alpha
Helix 16
16
A
537 541Right-handed 310
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There are 11 sheets in PDB entry 1R6V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 67first strand
Strand 2
A
72 76anti-parallel
Strand 3
A
41 46anti-parallel
Strand 4
A
97 101anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 108first strand
Strand 2
A
276 277anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 113first strand
Strand 2
A
382 386anti-parallel
Strand 3
A
355 358anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 238first strand
Strand 2
A
165 170parallel
Strand 3
A
271 274parallel
Strand 4
A
298 302parallel
Strand 5
A
322 330parallel
Strand 6
A
333 336anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 238first strand
Strand 2
A
165 170parallel
Strand 3
A
271 274parallel
Strand 4
A
298 302parallel
Strand 5
A
322 330parallel
Strand 6
A
346 351parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 189first strand
Strand 2
A
194 196anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
495 502first strand
Strand 2
A
454 463anti-parallel
Strand 3
A
557 561parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 489first strand
Strand 2
A
474 479anti-parallel
Strand 3
A
504 513anti-parallel
Strand 4
A
543 551anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
603 605first strand
Strand 2
A
566 570anti-parallel
Strand 3
A
627 635anti-parallel
Strand 4
A
638 646anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 597first strand
Strand 2
A
581 585anti-parallel
Strand 3
A
610 618anti-parallel
Strand 4
A
652 655anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 597first strand
Strand 2
A
581 585anti-parallel
Strand 3
A
610 618anti-parallel
Strand 4
A
674 677anti-parallel
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