Analysis of interatomic Contacts of Structural Units in PDB entry:
1R97


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1R97 entry

There is 1 chain in PDB entry 1R97 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 82GLY 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 1R97. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
82 97Right-handed alpha
Helix 2
2
A
107 125Right-handed alpha
Helix 3
3
A
140 154Right-handed alpha
Helix 4
4
A
168 176Right-handed alpha
Helix 5
5
A
202 229Right-handed alpha
Helix 6
6
A
231 240Right-handed alpha
Helix 7
7
A
247 254Right-handed alpha
Helix 8
8
A
264 278Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 1R97. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 103first strand
Strand 2
A
130 136parallel
Strand 3
A
158 167parallel
Strand 4
A
189 192parallel
Strand 5
A
243 246anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 103first strand
Strand 2
A
130 136parallel
Strand 3
A
158 167parallel
Strand 4
A
182 184parallel
Strand 5
A
258 259parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il