Analysis of interatomic Contacts of Structural Units in PDB entry:
1RCX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1RCX entry

There are 16 chains in PDB entry 1RCX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
L	ALA 9	VAL 475
S	MET 1	TYR 123
B	ALA 9	VAL 475
C	MET 1	TYR 123
E	ALA 9	VAL 475
F	MET 1	TYR 123
H	ALA 9	VAL 475
I	MET 1	TYR 123
K	ALA 9	VAL 475
M	MET 1	TYR 123
O	ALA 9	VAL 475
P	MET 1	TYR 123
R	ALA 9	VAL 475
T	MET 1	TYR 123
V	ALA 9	VAL 475
W	MET 1	TYR 123

There are200 helices in PDB entry 1RCX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	L	20	24	Right-handed 310
Helix 2	2	L	50	60	Right-handed alpha
Helix 3	3	L	70	74	Right-handed 310
Helix 4	4	L	77	80	Right-handed alpha
Helix 5	5	L	105	107	Right-handed 310
Helix 6	6	L	113	120	Right-handed alpha
Helix 7	7	L	124	126	Right-handed 310
Helix 8	8	L	142	147	Right-handed alpha
Helix 9	9	L	155	162	Right-handed alpha
Helix 10	10	L	182	195	Right-handed alpha
Helix 11	11	L	214	232	Right-handed alpha
Helix 12	12	L	247	260	Right-handed alpha
Helix 13	13	L	269	272	Right-handed alpha
Helix 14	14	L	274	287	Right-handed alpha
Helix 15	15	L	298	302	Right-handed alpha
Helix 16	16	L	311	321	Right-handed alpha
Helix 17	17	L	339	350	Right-handed alpha
Helix 18	18	L	358	360	Right-handed 310
Helix 19	19	L	384	394	Right-handed 310
Helix 20	20	L	404	407	Right-handed alpha
Helix 21	21	L	413	432	Right-handed alpha
Helix 22	22	L	437	450	Right-handed alpha
Helix 23	23	L	453	462	Right-handed alpha
Helix 24	24	S	23	35	Right-handed alpha
Helix 25	25	S	80	93	Right-handed alpha
Helix 26	26	B	20	24	Right-handed 310
Helix 27	27	B	50	60	Right-handed alpha
Helix 28	28	B	70	74	Right-handed 310
Helix 29	29	B	77	80	Right-handed alpha
Helix 30	30	B	105	107	Right-handed 310
Helix 31	31	B	113	120	Right-handed alpha
Helix 32	32	B	124	126	Right-handed 310
Helix 33	33	B	142	147	Right-handed alpha
Helix 34	34	B	155	162	Right-handed alpha
Helix 35	35	B	182	195	Right-handed alpha
Helix 36	36	B	214	232	Right-handed alpha
Helix 37	37	B	247	260	Right-handed alpha
Helix 38	38	B	269	272	Right-handed alpha
Helix 39	39	B	274	287	Right-handed alpha
Helix 40	40	B	298	302	Right-handed alpha
Helix 41	41	B	311	321	Right-handed alpha
Helix 42	42	B	339	350	Right-handed alpha
Helix 43	43	B	358	360	Right-handed 310
Helix 44	44	B	384	394	Right-handed 310
Helix 45	45	B	404	407	Right-handed alpha
Helix 46	46	B	413	432	Right-handed alpha
Helix 47	47	B	437	450	Right-handed alpha
Helix 48	48	B	453	462	Right-handed alpha
Helix 49	49	C	23	35	Right-handed alpha
Helix 50	50	C	80	93	Right-handed alpha
Helix 51	51	E	20	24	Right-handed 310
Helix 52	52	E	50	60	Right-handed alpha
Helix 53	53	E	70	74	Right-handed 310
Helix 54	54	E	77	80	Right-handed alpha
Helix 55	55	E	105	107	Right-handed 310
Helix 56	56	E	113	120	Right-handed alpha
Helix 57	57	E	124	126	Right-handed 310
Helix 58	58	E	142	147	Right-handed alpha
Helix 59	59	E	155	162	Right-handed alpha
Helix 60	60	E	182	195	Right-handed alpha
Helix 61	61	E	214	232	Right-handed alpha
Helix 62	62	E	247	260	Right-handed alpha
Helix 63	63	E	269	272	Right-handed alpha
Helix 64	64	E	274	287	Right-handed alpha
Helix 65	65	E	298	302	Right-handed alpha
Helix 66	66	E	311	321	Right-handed alpha
Helix 67	67	E	339	350	Right-handed alpha
Helix 68	68	E	358	360	Right-handed 310
Helix 69	69	E	384	394	Right-handed 310
Helix 70	70	E	404	407	Right-handed alpha
Helix 71	71	E	413	432	Right-handed alpha
Helix 72	72	E	437	450	Right-handed alpha
Helix 73	73	E	453	462	Right-handed alpha
Helix 74	74	F	23	35	Right-handed alpha
Helix 75	75	F	80	93	Right-handed alpha
Helix 76	76	H	20	24	Right-handed 310
Helix 77	77	H	50	60	Right-handed alpha
Helix 78	78	H	70	74	Right-handed 310
Helix 79	79	H	77	80	Right-handed alpha
Helix 80	80	H	105	107	Right-handed 310
Helix 81	81	H	113	120	Right-handed alpha
Helix 82	82	H	124	126	Right-handed 310
Helix 83	83	H	142	147	Right-handed alpha
Helix 84	84	H	155	162	Right-handed alpha
Helix 85	85	H	182	195	Right-handed alpha
Helix 86	86	H	214	232	Right-handed alpha
Helix 87	87	H	247	260	Right-handed alpha
Helix 88	88	H	269	272	Right-handed alpha
Helix 89	89	H	274	287	Right-handed alpha
Helix 90	90	H	298	302	Right-handed alpha
Helix 91	91	H	311	321	Right-handed alpha
Helix 92	92	H	339	350	Right-handed alpha
Helix 93	93	H	358	360	Right-handed 310
Helix 94	94	H	384	394	Right-handed 310
Helix 95	95	H	404	407	Right-handed alpha
Helix 96	96	H	413	432	Right-handed alpha
Helix 97	97	H	437	450	Right-handed alpha
Helix 98	98	H	453	462	Right-handed alpha
Helix 99	99	I	23	35	Right-handed alpha
Helix 100	100	I	80	93	Right-handed alpha
Helix 101	101	K	20	24	Right-handed 310
Helix 102	102	K	50	60	Right-handed alpha
Helix 103	103	K	70	74	Right-handed 310
Helix 104	104	K	77	80	Right-handed alpha
Helix 105	105	K	105	107	Right-handed 310
Helix 106	106	K	113	120	Right-handed alpha
Helix 107	107	K	124	126	Right-handed 310
Helix 108	108	K	142	147	Right-handed alpha
Helix 109	109	K	155	162	Right-handed alpha
Helix 110	110	K	182	195	Right-handed alpha
Helix 111	111	K	214	232	Right-handed alpha
Helix 112	112	K	247	260	Right-handed alpha
Helix 113	113	K	269	272	Right-handed alpha
Helix 114	114	K	274	287	Right-handed alpha
Helix 115	115	K	298	302	Right-handed alpha
Helix 116	116	K	311	321	Right-handed alpha
Helix 117	117	K	339	350	Right-handed alpha
Helix 118	118	K	358	360	Right-handed 310
Helix 119	119	K	384	394	Right-handed 310
Helix 120	120	K	404	407	Right-handed alpha
Helix 121	121	K	413	432	Right-handed alpha
Helix 122	122	K	437	450	Right-handed alpha
Helix 123	123	K	453	462	Right-handed alpha
Helix 124	124	M	23	35	Right-handed alpha
Helix 125	125	M	80	93	Right-handed alpha
Helix 126	126	O	20	24	Right-handed 310
Helix 127	127	O	50	60	Right-handed alpha
Helix 128	128	O	70	74	Right-handed 310
Helix 129	129	O	77	80	Right-handed alpha
Helix 130	130	O	105	107	Right-handed 310
Helix 131	131	O	113	120	Right-handed alpha
Helix 132	132	O	124	126	Right-handed 310
Helix 133	133	O	142	147	Right-handed alpha
Helix 134	134	O	155	162	Right-handed alpha
Helix 135	135	O	182	195	Right-handed alpha
Helix 136	136	O	214	232	Right-handed alpha
Helix 137	137	O	247	260	Right-handed alpha
Helix 138	138	O	269	272	Right-handed alpha
Helix 139	139	O	274	287	Right-handed alpha
Helix 140	140	O	298	302	Right-handed alpha
Helix 141	141	O	311	321	Right-handed alpha
Helix 142	142	O	339	350	Right-handed alpha
Helix 143	143	O	358	360	Right-handed 310
Helix 144	144	O	384	394	Right-handed 310
Helix 145	145	O	404	407	Right-handed alpha
Helix 146	146	O	413	432	Right-handed alpha
Helix 147	147	O	437	450	Right-handed alpha
Helix 148	148	O	453	462	Right-handed alpha
Helix 149	149	P	23	35	Right-handed alpha
Helix 150	150	P	80	93	Right-handed alpha
Helix 151	151	R	20	24	Right-handed 310
Helix 152	152	R	50	60	Right-handed alpha
Helix 153	153	R	70	74	Right-handed 310
Helix 154	154	R	77	80	Right-handed alpha
Helix 155	155	R	105	107	Right-handed 310
Helix 156	156	R	113	120	Right-handed alpha
Helix 157	157	R	124	126	Right-handed 310
Helix 158	158	R	142	147	Right-handed alpha
Helix 159	159	R	155	162	Right-handed alpha
Helix 160	160	R	182	195	Right-handed alpha
Helix 161	161	R	214	232	Right-handed alpha
Helix 162	162	R	247	260	Right-handed alpha
Helix 163	163	R	269	272	Right-handed alpha
Helix 164	164	R	274	287	Right-handed alpha
Helix 165	165	R	298	302	Right-handed alpha
Helix 166	166	R	311	321	Right-handed alpha
Helix 167	167	R	339	350	Right-handed alpha
Helix 168	168	R	358	360	Right-handed 310
Helix 169	169	R	384	394	Right-handed 310
Helix 170	170	R	404	407	Right-handed alpha
Helix 171	171	R	413	432	Right-handed alpha
Helix 172	172	R	437	450	Right-handed alpha
Helix 173	173	R	453	462	Right-handed alpha
Helix 174	174	T	23	35	Right-handed alpha
Helix 175	175	T	80	93	Right-handed alpha
Helix 176	176	V	20	24	Right-handed 310
Helix 177	177	V	50	60	Right-handed alpha
Helix 178	178	V	70	74	Right-handed 310
Helix 179	179	V	77	80	Right-handed alpha
Helix 180	180	V	105	107	Right-handed 310
Helix 181	181	V	113	120	Right-handed alpha
Helix 182	182	V	124	126	Right-handed 310
Helix 183	183	V	142	147	Right-handed alpha
Helix 184	184	V	155	162	Right-handed alpha
Helix 185	185	V	182	195	Right-handed alpha
Helix 186	186	V	214	232	Right-handed alpha
Helix 187	187	V	247	260	Right-handed alpha
Helix 188	188	V	269	272	Right-handed alpha
Helix 189	189	V	274	287	Right-handed alpha
Helix 190	190	V	298	302	Right-handed alpha
Helix 191	191	V	311	321	Right-handed alpha
Helix 192	192	V	339	350	Right-handed alpha
Helix 193	193	V	358	360	Right-handed 310
Helix 194	194	V	384	394	Right-handed 310
Helix 195	195	V	404	407	Right-handed alpha
Helix 196	196	V	413	432	Right-handed alpha
Helix 197	197	V	437	450	Right-handed alpha
Helix 198	198	V	453	462	Right-handed alpha
Helix 199	199	W	23	35	Right-handed alpha
Helix 200	200	W	80	93	Right-handed alpha

There are 40 sheets in PDB entry 1RCX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, BB, CC, DD, EE, FF, GG, HH, II, JJ, KK, LL, MM, NN,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	132	139	first strand
Strand 2	L	36	43	anti-parallel
Strand 3	L	97	103	anti-parallel
Strand 4	L	83	89	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	169	171	first strand
Strand 2	L	398	401	parallel
Strand 3	L	375	379	parallel
Strand 4	L	325	327	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	199	201	first strand
Strand 2	L	237	239	parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	264	268	first strand
Strand 2	L	290	294	parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	68	70	first strand
Strand 2	S	39	45	anti-parallel
Strand 3	S	98	104	anti-parallel
Strand 4	S	113	118	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	139	first strand
Strand 2	B	36	43	anti-parallel
Strand 3	B	97	103	anti-parallel
Strand 4	B	83	89	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	169	171	first strand
Strand 2	B	398	401	parallel
Strand 3	B	375	379	parallel
Strand 4	B	325	327	parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	201	first strand
Strand 2	B	237	239	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	264	268	first strand
Strand 2	B	290	294	parallel

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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	70	first strand
Strand 2	C	39	45	anti-parallel
Strand 3	C	98	104	anti-parallel
Strand 4	C	113	118	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	132	139	first strand
Strand 2	E	36	43	anti-parallel
Strand 3	E	97	103	anti-parallel
Strand 4	E	83	89	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	171	first strand
Strand 2	E	398	401	parallel
Strand 3	E	375	379	parallel
Strand 4	E	325	327	parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	199	201	first strand
Strand 2	E	237	239	parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	264	268	first strand
Strand 2	E	290	294	parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	70	first strand
Strand 2	F	39	45	anti-parallel
Strand 3	F	98	104	anti-parallel
Strand 4	F	113	118	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	132	139	first strand
Strand 2	H	36	43	anti-parallel
Strand 3	H	97	103	anti-parallel
Strand 4	H	83	89	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	169	171	first strand
Strand 2	H	398	401	parallel
Strand 3	H	375	379	parallel
Strand 4	H	325	327	parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	199	201	first strand
Strand 2	H	237	239	parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	264	268	first strand
Strand 2	H	290	294	parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	68	70	first strand
Strand 2	I	39	45	anti-parallel
Strand 3	I	98	104	anti-parallel
Strand 4	I	113	118	anti-parallel

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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	132	139	first strand
Strand 2	K	36	43	anti-parallel
Strand 3	K	97	103	anti-parallel
Strand 4	K	83	89	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	169	171	first strand
Strand 2	K	398	401	parallel
Strand 3	K	375	379	parallel
Strand 4	K	325	327	parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	199	201	first strand
Strand 2	K	237	239	parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	264	268	first strand
Strand 2	K	290	294	parallel

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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	68	70	first strand
Strand 2	M	39	45	anti-parallel
Strand 3	M	98	104	anti-parallel
Strand 4	M	113	118	anti-parallel

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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	132	139	first strand
Strand 2	O	36	43	anti-parallel
Strand 3	O	97	103	anti-parallel
Strand 4	O	83	89	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	169	171	first strand
Strand 2	O	398	401	parallel
Strand 3	O	375	379	parallel
Strand 4	O	325	327	parallel

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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	199	201	first strand
Strand 2	O	237	239	parallel

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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	264	268	first strand
Strand 2	O	290	294	parallel

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There are 4 strands in DD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	68	70	first strand
Strand 2	P	39	45	anti-parallel
Strand 3	P	98	104	anti-parallel
Strand 4	P	113	118	anti-parallel

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There are 4 strands in EE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	132	139	first strand
Strand 2	R	36	43	anti-parallel
Strand 3	R	97	103	anti-parallel
Strand 4	R	83	89	anti-parallel

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There are 4 strands in FF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	169	171	first strand
Strand 2	R	398	401	parallel
Strand 3	R	375	379	parallel
Strand 4	R	325	327	parallel

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There are 2 strands in GG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	199	201	first strand
Strand 2	R	237	239	parallel

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There are 2 strands in HH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	264	268	first strand
Strand 2	R	290	294	parallel

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There are 4 strands in II sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	68	70	first strand
Strand 2	T	39	45	anti-parallel
Strand 3	T	98	104	anti-parallel
Strand 4	T	113	118	anti-parallel

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There are 4 strands in JJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	132	139	first strand
Strand 2	V	36	43	anti-parallel
Strand 3	V	97	103	anti-parallel
Strand 4	V	83	89	anti-parallel

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There are 4 strands in KK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	169	171	first strand
Strand 2	V	398	401	parallel
Strand 3	V	375	379	parallel
Strand 4	V	325	327	parallel

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There are 2 strands in LL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	199	201	first strand
Strand 2	V	237	239	parallel

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There are 2 strands in MM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	264	268	first strand
Strand 2	V	290	294	parallel

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There are 4 strands in NN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	68	70	first strand
Strand 2	W	39	45	anti-parallel
Strand 3	W	98	104	anti-parallel
Strand 4	W	113	118	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1RCX

Analysis of interatomic Contacts of Structural Units in PDB entry:
1RCX