Analysis of interatomic Contacts of Structural Units in PDB entry:
1RH8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RH8 entry

There is 1 chain in PDB entry 1RH8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 4635SER 4776
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 1RH8. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
4695 4700Right-handed alpha
Helix 2
2
A
4705 4710Right-handed alpha
Helix 3
3
A
4723 4728Right-handed alpha
Helix 4
4
A
4758 4762Right-handed 310
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There are 2 sheets in PDB entry 1RH8. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
4712 4719first strand
Strand 2
A
4653 4662anti-parallel
Strand 3
A
4642 4650anti-parallel
Strand 4
A
4766 4769anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
4689 4690first strand
Strand 2
A
4676 4681anti-parallel
Strand 3
A
4731 4739anti-parallel
Strand 4
A
4745 4754anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il