Analysis of interatomic Contacts of Structural Units in PDB entry:
1RLR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RLR entry

There is 1 chain in PDB entry 1RLR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 10LEU 748
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 1RLR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 31Right-handed alpha
Helix 2
2
A
37 47Right-handed alpha
Helix 3
3
A
54 68Right-handed alpha
Helix 4
4
A
76 95Right-handed alpha
Helix 5
5
A
101 112Right-handed alpha
Helix 6
6
A
117 123Right-handed alpha
Helix 7
7
A
124 133Right-handed alpha
Helix 8
8
A
134 135Right-handed 310
Helix 9
9
A
136 143Right-handed 310
Helix 10
10
A
144 155Right-handed alpha
Helix 11
11
A
168 182Right-handed alpha
Helix 12
12
A
188 202Right-handed alpha
Helix 13
13
A
208 215Right-handed alpha
Helix 14
14
A
233 247Right-handed alpha
Helix 15
15
A
278 290Right-handed alpha
Helix 16
16
A
312 317Right-handed alpha
Helix 17
17
A
325 329Right-handed 310
Helix 18
18
A
340 349Right-handed alpha
Helix 19
19
A
363 371Right-handed alpha
Helix 20
20
A
371 385Right-handed alpha
Helix 21
21
A
395 410Right-handed alpha
Helix 22
22
A
417 423Right-handed alpha
Helix 23
23
A
474 476Right-handed 310
Helix 24
24
A
477 496Right-handed alpha
Helix 25
25
A
500 511Right-handed alpha
Helix 26
26
A
519 527Right-handed alpha
Helix 27
27
A
536 563Right-handed alpha
Helix 28
28
A
567 570Right-handed 310
Helix 29
29
A
572 576Right-handed 310
Helix 30
30
A
578 583Right-handed alpha
Helix 31
31
A
584 590Right-handed 310
Helix 32
32
A
598 610Right-handed alpha
Helix 33
33
A
623 629Right-handed alpha
Helix 34
34
A
658 663Right-handed alpha
Helix 35
35
A
668 672Right-handed 310
Helix 36
36
A
675 687Right-handed alpha
Helix 37
37
A
700 704Right-handed 310
Helix 38
38
A
704 708Right-handed 310
Helix 39
39
A
710 724Right-handed alpha
Helix 40
40
A
739 744Right-handed alpha
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There are 5 sheets in PDB entry 1RLR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 206first strand
Strand 2
A
463 468anti-parallel
Strand 3
A
513 518parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 461first strand
Strand 2
A
226 229anti-parallel
Strand 3
A
254 257parallel
Strand 4
A
302 307parallel
Strand 5
A
334 339parallel
Strand 6
A
412 416parallel
Strand 7
A
728 729anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 356first strand
Strand 2
A
390 394anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
642 647first strand
Strand 2
A
650 655anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
697 699first strand
Strand 2
A
732 734parallel
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