Analysis of interatomic Contacts of Structural Units in PDB entry:
1RLZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RLZ entry

There is 1 chain in PDB entry 1RLZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 9ASP 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 1RLZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 18Right-handed alpha
Helix 2
2
A
35 39Right-handed 310
Helix 3
3
A
41 48Right-handed alpha
Helix 4
4
A
49 52Right-handed 310
Helix 5
5
A
53 74Right-handed alpha
Helix 6
6
A
105 110Right-handed alpha
Helix 7
7
A
111 122Right-handed alpha
Helix 8
8
A
131 141Right-handed alpha
Helix 9
9
A
154 161Right-handed alpha
Helix 10
10
A
173 197Right-handed alpha
Helix 11
11
A
202 215Right-handed alpha
Helix 12
12
A
219 227Right-handed alpha
Helix 13
13
A
239 252Right-handed alpha
Helix 14
14
A
259 272Right-handed alpha
Helix 15
15
A
283 296Right-handed alpha
Helix 16
16
A
320 328Right-handed alpha
Helix 17
17
A
342 354Right-handed alpha
Helix 18
18
A
355 357Right-handed 310
Helix 19
19
A
358 366Right-handed alpha
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There are 2 sheets in PDB entry 1RLZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 232first strand
Strand 2
A
127 130parallel
Strand 3
A
98 103parallel
Strand 4
A
276 281parallel
Strand 5
A
302 307parallel
Strand 6
A
337 340parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
169 172anti-parallel
Strand 3
A
163 166anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il