Analysis of interatomic Contacts of Structural Units in PDB entry:
1RMG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RMG entry

There is 1 chain in PDB entry 1RMG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1GLY 422
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 3 helices in PDB entry 1RMG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
A
11 19Right-handed alpha
Helix 2
H2
A
36 48Right-handed alpha
Helix 3
H3
A
116 122Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 1RMG. Click on sheet of interest to get list of strands forming it: 1, 1A, 2, 3,

There are 12 strands in 1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 69first strand
Strand 2
A
93 96parallel
Strand 3
A
130 133parallel
Strand 4
A
153 156parallel
Strand 5
A
179 184parallel
Strand 6
A
200 203parallel
Strand 7
A
222 224parallel
Strand 8
A
250 255parallel
Strand 9
A
278 281parallel
Strand 10
A
318 322parallel
Strand 11
A
348 350parallel
Strand 12
A
369 375anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in 1A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 72first strand
Strand 2
A
98 99parallel
Strand 3
A
135 136parallel
Strand 4
A
158 159parallel
Strand 5
A
205 207parallel
Strand 6
A
231 234parallel
Strand 7
A
260 262parallel
Strand 8
A
296 298parallel
Strand 9
A
328 329parallel
Strand 10
A
353 356parallel
Back to list of sheets
Back to top of page

There are 12 strands in 2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 22first strand
Strand 2
A
51 55parallel
Strand 3
A
74 79parallel
Strand 4
A
101 105parallel
Strand 5
A
138 141parallel
Strand 6
A
161 164parallel
Strand 7
A
186 189parallel
Strand 8
A
209 212parallel
Strand 9
A
236 238parallel
Strand 10
A
264 267parallel
Strand 11
A
300 303parallel
Strand 12
A
331 334parallel
Back to list of sheets
Back to top of page

There are 11 strands in 3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
80 84parallel
Strand 3
A
110 113parallel
Strand 4
A
143 146parallel
Strand 5
A
166 171parallel
Strand 6
A
191 194parallel
Strand 7
A
214 217parallel
Strand 8
A
241 244parallel
Strand 9
A
269 272parallel
Strand 10
A
305 309parallel
Strand 11
A
336 340parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il