Analysis of interatomic Contacts of Structural Units in PDB entry:
1RP3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RP3 entry

There are 8 chains in PDB entry 1RP3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ASN 234
B
 VAL 2THR 88
C
 LYS 2PRO 235
D
 ASN 3THR 88
E
 LYS 2LEU 236
F
 ARG 4THR 88
G
 MET 1LEU 236
H
 MET 1THR 88
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 1RP3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 31Right-handed alpha
Helix 2
2
A
38 56Right-handed alpha
Helix 3
3
A
62 83Right-handed alpha
Helix 4
4
A
88 110Right-handed alpha
Helix 5
5
A
114 123Right-handed alpha
Helix 6
6
A
125 159Right-handed alpha
Helix 7
8
A
163 183Right-handed alpha
Helix 8
9
A
186 198Right-handed alpha
Helix 9
10
A
202 211Right-handed alpha
Helix 10
11
A
213 234Right-handed alpha
Helix 11
12
B
4 17Right-handed alpha
Helix 12
13
B
30 47Right-handed alpha
Helix 13
14
B
55 69Right-handed alpha
Helix 14
15
B
75 88Right-handed alpha
Helix 15
16
C
3 31Right-handed alpha
Helix 16
17
C
38 56Right-handed alpha
Helix 17
18
C
61 83Right-handed alpha
Helix 18
19
C
88 110Right-handed alpha
Helix 19
20
C
114 123Right-handed alpha
Helix 20
21
C
125 156Right-handed alpha
Helix 21
22
C
164 184Right-handed alpha
Helix 22
23
C
186 198Right-handed alpha
Helix 23
24
C
202 211Right-handed alpha
Helix 24
25
C
213 234Right-handed alpha
Helix 25
26
D
3 17Right-handed alpha
Helix 26
27
D
35 48Right-handed alpha
Helix 27
28
D
50 69Right-handed alpha
Helix 28
29
D
75 88Right-handed alpha
Helix 29
30
E
3 31Right-handed alpha
Helix 30
31
E
38 57Right-handed alpha
Helix 31
32
E
61 83Right-handed alpha
Helix 32
33
E
88 110Right-handed alpha
Helix 33
34
E
114 123Right-handed alpha
Helix 34
35
E
125 158Right-handed alpha
Helix 35
36
E
164 184Right-handed alpha
Helix 36
37
E
186 198Right-handed alpha
Helix 37
38
E
202 211Right-handed alpha
Helix 38
39
E
213 234Right-handed alpha
Helix 39
40
F
4 17Right-handed alpha
Helix 40
41
F
35 48Right-handed alpha
Helix 41
42
F
55 69Right-handed alpha
Helix 42
43
F
75 88Right-handed alpha
Helix 43
44
G
3 31Right-handed alpha
Helix 44
45
G
38 57Right-handed alpha
Helix 45
46
G
61 83Right-handed alpha
Helix 46
47
G
88 110Right-handed alpha
Helix 47
48
G
114 123Right-handed alpha
Helix 48
49
G
125 156Right-handed alpha
Helix 49
50
G
168 184Right-handed alpha
Helix 50
51
G
186 198Right-handed alpha
Helix 51
52
G
202 211Right-handed alpha
Helix 52
53
G
213 234Right-handed alpha
Helix 53
54
H
3 18Right-handed alpha
Helix 54
55
H
35 47Right-handed alpha
Helix 55
56
H
55 70Right-handed alpha
Helix 56
57
H
75 88Right-handed alpha
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There are no sheets in PDB entry 1RP3
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il