Analysis of interatomic Contacts of Structural Units in PDB entry:
1RRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RRV entry

There are 4 chains in PDB entry 1RRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 401
B
 MET 1GLY 400
C
 ASN 3ASN 3
D
 ASN 3ASN 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 1RRV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 27Right-handed alpha
Helix 2
2
A
36 38Right-handed 310
Helix 3
3
A
39 47Right-handed alpha
Helix 4
4
A
56 60Right-handed 310
Helix 5
5
A
69 92Right-handed alpha
Helix 6
6
A
103 118Right-handed alpha
Helix 7
7
A
127 131Right-handed 310
Helix 8
8
A
150 177Right-handed alpha
Helix 9
9
A
184 189Right-handed alpha
Helix 10
10
A
226 235Right-handed alpha
Helix 11
11
A
249 266Right-handed alpha
Helix 12
12
A
295 300Right-handed alpha
Helix 13
13
A
301 303Right-handed 310
Helix 14
14
A
311 322Right-handed alpha
Helix 15
15
A
333 344Right-handed alpha
Helix 16
16
A
356 368Right-handed alpha
Helix 17
17
A
369 380Right-handed alpha
Helix 18
18
A
386 401Right-handed alpha
Helix 19
19
B
10 27Right-handed alpha
Helix 20
20
B
36 38Right-handed 310
Helix 21
21
B
39 47Right-handed alpha
Helix 22
22
B
56 60Right-handed 310
Helix 23
23
B
69 92Right-handed alpha
Helix 24
24
B
103 117Right-handed alpha
Helix 25
25
B
127 131Right-handed 310
Helix 26
26
B
150 177Right-handed alpha
Helix 27
27
B
184 189Right-handed alpha
Helix 28
28
B
226 235Right-handed alpha
Helix 29
29
B
249 266Right-handed alpha
Helix 30
30
B
295 300Right-handed alpha
Helix 31
31
B
311 321Right-handed alpha
Helix 32
32
B
333 345Right-handed alpha
Helix 33
33
B
356 368Right-handed alpha
Helix 34
34
B
369 381Right-handed alpha
Helix 35
35
B
386 400Right-handed alpha
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There are 4 sheets in PDB entry 1RRV. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
30 35parallel
Strand 3
A
2 8parallel
Strand 4
A
97 102parallel
Strand 5
A
121 125parallel
Strand 6
A
195 196parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 291first strand
Strand 2
A
270 273parallel
Strand 3
A
240 242parallel
Strand 4
A
305 308parallel
Strand 5
A
325 327parallel
Strand 6
A
347 349parallel
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There are 6 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 52first strand
Strand 2
B
30 35parallel
Strand 3
B
2 8parallel
Strand 4
B
97 102parallel
Strand 5
B
121 125parallel
Strand 6
B
195 196parallel
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There are 6 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 291first strand
Strand 2
B
270 273parallel
Strand 3
B
240 243parallel
Strand 4
B
305 308parallel
Strand 5
B
325 327parallel
Strand 6
B
347 349parallel
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