Analysis of interatomic Contacts of Structural Units in PDB entry:
1RT8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RT8 entry

There is 1 chain in PDB entry 1RT8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 110VAL 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 31 helices in PDB entry 1RT8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
111 127Right-handed alpha
Helix 2
2
A
132 136Right-handed 310
Helix 3
3
A
143 149Right-handed alpha
Helix 4
4
A
152 163Right-handed alpha
Helix 5
5
A
168 172Right-handed 310
Helix 6
6
A
182 201Right-handed alpha
Helix 7
7
A
209 215Right-handed alpha
Helix 8
8
A
217 233Right-handed alpha
Helix 9
9
A
254 259Right-handed alpha
Helix 10
10
A
262 278Right-handed alpha
Helix 11
11
A
288 292Right-handed 310
Helix 12
12
A
294 305Right-handed alpha
Helix 13
13
A
311 316Right-handed 310
Helix 14
14
A
318 332Right-handed alpha
Helix 15
15
A
340 346Right-handed alpha
Helix 16
16
A
348 363Right-handed alpha
Helix 17
17
A
382 398Right-handed alpha
Helix 18
18
A
406 411Right-handed alpha
Helix 19
19
A
414 425Right-handed alpha
Helix 20
20
A
430 434Right-handed 310
Helix 21
21
A
445 463Right-handed alpha
Helix 22
22
A
471 477Right-handed alpha
Helix 23
23
A
479 499Right-handed alpha
Helix 24
24
A
510 523Right-handed alpha
Helix 25
25
A
536 541Right-handed 310
Helix 26
26
A
542 553Right-handed alpha
Helix 27
27
A
554 557Right-handed 310
Helix 28
28
A
558 562Right-handed 310
Helix 29
29
A
567 585Right-handed alpha
Helix 30
30
A
592 598Right-handed alpha
Helix 31
31
A
600 613Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1RT8
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il