Analysis of interatomic Contacts of Structural Units in PDB entry:
1RXV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RXV entry

There are 4 chains in PDB entry 1RXV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 G 2 G 1
D
 G 2 G 1
A
 ASP 4LYS 323
B
 ASP 4LYS 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 1RXV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 9Right-handed 310
Helix 2
2
A
15 20Right-handed 310
Helix 3
3
A
28 39Right-handed alpha
Helix 4
4
A
55 71Right-handed alpha
Helix 5
5
A
84 86Right-handed 310
Helix 6
6
A
87 112Right-handed alpha
Helix 7
7
A
116 123Right-handed alpha
Helix 8
8
A
127 142Right-handed alpha
Helix 9
9
A
151 162Right-handed alpha
Helix 10
10
A
173 178Right-handed alpha
Helix 11
11
A
211 219Right-handed alpha
Helix 12
12
A
221 232Right-handed alpha
Helix 13
13
A
244 256Right-handed alpha
Helix 14
14
A
257 265Right-handed alpha
Helix 15
15
A
271 281Right-handed alpha
Helix 16
16
A
296 305Right-handed alpha
Helix 17
17
A
311 321Right-handed alpha
Helix 18
18
B
4 9Right-handed 310
Helix 19
19
B
15 20Right-handed 310
Helix 20
20
B
28 39Right-handed alpha
Helix 21
21
B
55 71Right-handed alpha
Helix 22
22
B
84 86Right-handed 310
Helix 23
23
B
87 112Right-handed alpha
Helix 24
24
B
115 124Right-handed alpha
Helix 25
25
B
127 142Right-handed alpha
Helix 26
26
B
151 162Right-handed alpha
Helix 27
27
B
173 178Right-handed alpha
Helix 28
28
B
211 219Right-handed alpha
Helix 29
29
B
221 233Right-handed alpha
Helix 30
30
B
244 254Right-handed alpha
Helix 31
31
B
257 265Right-handed alpha
Helix 32
32
B
271 281Right-handed alpha
Helix 33
33
B
296 305Right-handed alpha
Helix 34
34
B
311 320Right-handed alpha
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There are 3 sheets in PDB entry 1RXV. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 13first strand
Strand 2
A
207 210anti-parallel
Strand 3
A
182 185anti-parallel
Strand 4
A
167 169parallel
Strand 5
A
23 27parallel
Strand 6
A
74 79parallel
Strand 7
A
145 147parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 234first strand
Strand 2
A
237 238anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 13first strand
Strand 2
B
207 210anti-parallel
Strand 3
B
182 185anti-parallel
Strand 4
B
167 169parallel
Strand 5
B
23 27parallel
Strand 6
B
74 79parallel
Strand 7
B
145 147parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il