Analysis of interatomic Contacts of Structural Units in PDB entry:
1RZM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RZM entry

There are 2 chains in PDB entry 1RZM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 338
B
 MET 1ASN 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 1RZM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 24Right-handed alpha
Helix 2
2
A
43 48Right-handed 310
Helix 3
3
A
49 55Right-handed alpha
Helix 4
4
A
106 119Right-handed alpha
Helix 5
5
A
143 158Right-handed alpha
Helix 6
6
A
170 178Right-handed alpha
Helix 7
7
A
184 188Right-handed 310
Helix 8
8
A
190 200Right-handed alpha
Helix 9
9
A
213 226Right-handed alpha
Helix 10
10
A
253 262Right-handed alpha
Helix 11
11
A
276 278Right-handed 310
Helix 12
12
A
279 290Right-handed alpha
Helix 13
13
A
302 306Right-handed 310
Helix 14
14
A
315 334Right-handed alpha
Helix 15
15
B
10 22Right-handed alpha
Helix 16
16
B
23 25Right-handed 310
Helix 17
17
B
49 55Right-handed alpha
Helix 18
18
B
107 119Right-handed alpha
Helix 19
19
B
143 157Right-handed alpha
Helix 20
20
B
170 178Right-handed alpha
Helix 21
21
B
184 188Right-handed 310
Helix 22
22
B
190 198Right-handed alpha
Helix 23
23
B
213 227Right-handed alpha
Helix 24
24
B
253 262Right-handed alpha
Helix 25
25
B
269 275Right-handed alpha
Helix 26
26
B
276 278Right-handed 310
Helix 27
27
B
279 291Right-handed alpha
Helix 28
28
B
302 306Right-handed 310
Helix 29
29
B
315 334Right-handed alpha
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There are 6 sheets in PDB entry 1RZM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 32first strand
Strand 2
A
37 42anti-parallel
Strand 3
A
2 5anti-parallel
Strand 4
A
59 63anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
89 90anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 338first strand
Strand 2
A
94 100parallel
Strand 3
A
294 298parallel
Strand 4
A
266 268parallel
Strand 5
A
232 236parallel
Strand 6
A
204 207parallel
Strand 7
A
180 183parallel
Strand 8
A
160 164parallel
Strand 9
A
124 126parallel
Strand 10
A
94 100parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 32first strand
Strand 2
B
37 42anti-parallel
Strand 3
B
2 5anti-parallel
Strand 4
B
59 63anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 84first strand
Strand 2
B
89 90anti-parallel
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There are 10 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
336 338first strand
Strand 2
B
94 100parallel
Strand 3
B
294 298parallel
Strand 4
B
266 268parallel
Strand 5
B
232 236parallel
Strand 6
B
204 207parallel
Strand 7
B
180 183parallel
Strand 8
B
160 164parallel
Strand 9
B
124 126parallel
Strand 10
B
94 100parallel
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