Analysis of interatomic Contacts of Structural Units in PDB entry:
1RZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RZV entry

There are 2 chains in PDB entry 1RZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1SER 477
B
 MSE 1SER 477
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 1RZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 32Right-handed alpha
Helix 2
2
A
44 49Right-handed alpha
Helix 3
3
A
85 90Right-handed alpha
Helix 4
4
A
106 124Right-handed alpha
Helix 5
5
A
138 143Right-handed alpha
Helix 6
6
A
143 151Right-handed alpha
Helix 7
7
A
172 179Right-handed 310
Helix 8
8
A
182 187Right-handed 310
Helix 9
9
A
199 207Right-handed alpha
Helix 10
10
A
214 221Right-handed alpha
Helix 11
11
A
223 228Right-handed alpha
Helix 12
12
A
230 236Right-handed alpha
Helix 13
13
A
237 239Right-handed 310
Helix 14
14
A
266 271Right-handed 310
Helix 15
15
A
272 284Right-handed alpha
Helix 16
16
A
305 311Right-handed alpha
Helix 17
17
A
312 319Right-handed alpha
Helix 18
18
A
330 343Right-handed alpha
Helix 19
19
A
355 366Right-handed alpha
Helix 20
20
A
380 389Right-handed alpha
Helix 21
21
A
397 404Right-handed alpha
Helix 22
22
A
408 414Right-handed alpha
Helix 23
23
A
426 442Right-handed alpha
Helix 24
24
A
443 456Right-handed alpha
Helix 25
25
A
460 476Right-handed alpha
Helix 26
26
B
17 32Right-handed alpha
Helix 27
27
B
44 51Right-handed alpha
Helix 28
28
B
85 90Right-handed alpha
Helix 29
29
B
106 124Right-handed alpha
Helix 30
30
B
138 142Right-handed alpha
Helix 31
31
B
142 151Right-handed alpha
Helix 32
32
B
172 179Right-handed 310
Helix 33
33
B
182 186Right-handed 310
Helix 34
34
B
199 207Right-handed alpha
Helix 35
35
B
214 221Right-handed alpha
Helix 36
36
B
223 228Right-handed alpha
Helix 37
37
B
230 236Right-handed alpha
Helix 38
38
B
237 239Right-handed 310
Helix 39
39
B
266 271Right-handed 310
Helix 40
40
B
272 284Right-handed alpha
Helix 41
41
B
305 311Right-handed alpha
Helix 42
42
B
312 319Right-handed alpha
Helix 43
43
B
330 343Right-handed alpha
Helix 44
44
B
355 366Right-handed alpha
Helix 45
45
B
380 389Right-handed alpha
Helix 46
46
B
397 403Right-handed alpha
Helix 47
47
B
408 414Right-handed alpha
Helix 48
48
B
426 442Right-handed alpha
Helix 49
49
B
443 456Right-handed alpha
Helix 50
50
B
460 477Right-handed alpha
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There are 6 sheets in PDB entry 1RZV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 60first strand
Strand 2
A
68 74anti-parallel
Strand 3
A
79 84anti-parallel
Strand 4
A
36 42parallel
Strand 5
A
2 6parallel
Strand 6
A
133 137parallel
Strand 7
A
158 162parallel
Strand 8
A
209 212parallel
Strand 9
A
241 243parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
196 198anti-parallel
Strand 3
A
192 193anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 352first strand
Strand 2
A
322 329parallel
Strand 3
A
293 300parallel
Strand 4
A
368 371parallel
Strand 5
A
391 395parallel
Strand 6
A
420 422parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 60first strand
Strand 2
B
68 75anti-parallel
Strand 3
B
78 84anti-parallel
Strand 4
B
36 42parallel
Strand 5
B
2 6parallel
Strand 6
B
133 137parallel
Strand 7
B
158 162parallel
Strand 8
B
209 212parallel
Strand 9
B
241 243parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 171first strand
Strand 2
B
196 198anti-parallel
Strand 3
B
192 193anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 352first strand
Strand 2
B
322 327parallel
Strand 3
B
293 297parallel
Strand 4
B
368 371parallel
Strand 5
B
391 395parallel
Strand 6
B
420 422parallel
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