Analysis of interatomic Contacts of Structural Units in PDB entry:
1S5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1S5Z entry

There are 6 chains in PDB entry 1S5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 6GLU 155
B
 VAL 6GLU 155
C
 VAL 6GLU 155
D
 VAL 6GLU 155
E
 VAL 6GLU 155
F
 VAL 6GLU 155
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 1S5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 22Right-handed alpha
Helix 2
2
A
24 36Right-handed alpha
Helix 3
3
A
48 56Right-handed alpha
Helix 4
4
A
57 60Right-handed 310
Helix 5
5
A
64 73Right-handed alpha
Helix 6
6
A
86 96Right-handed alpha
Helix 7
7
A
99 103Right-handed 310
Helix 8
8
A
107 113Right-handed alpha
Helix 9
9
A
115 119Right-handed 310
Helix 10
10
A
126 138Right-handed alpha
Helix 11
11
A
139 143Right-handed 310
Helix 12
12
B
16 22Right-handed alpha
Helix 13
13
B
24 36Right-handed alpha
Helix 14
14
B
48 56Right-handed alpha
Helix 15
15
B
57 60Right-handed 310
Helix 16
16
B
64 73Right-handed alpha
Helix 17
17
B
86 96Right-handed alpha
Helix 18
18
B
99 103Right-handed 310
Helix 19
19
B
107 113Right-handed alpha
Helix 20
20
B
115 119Right-handed 310
Helix 21
21
B
126 138Right-handed alpha
Helix 22
22
B
139 143Right-handed 310
Helix 23
23
C
16 22Right-handed alpha
Helix 24
24
C
24 36Right-handed alpha
Helix 25
25
C
48 56Right-handed alpha
Helix 26
26
C
57 60Right-handed 310
Helix 27
27
C
64 73Right-handed alpha
Helix 28
28
C
86 96Right-handed alpha
Helix 29
29
C
99 103Right-handed 310
Helix 30
30
C
107 113Right-handed alpha
Helix 31
31
C
115 119Right-handed 310
Helix 32
32
C
126 138Right-handed alpha
Helix 33
33
C
139 143Right-handed 310
Helix 34
34
D
16 22Right-handed alpha
Helix 35
35
D
24 36Right-handed alpha
Helix 36
36
D
48 56Right-handed alpha
Helix 37
37
D
57 60Right-handed 310
Helix 38
38
D
64 73Right-handed alpha
Helix 39
39
D
86 96Right-handed alpha
Helix 40
40
D
99 103Right-handed 310
Helix 41
41
D
107 113Right-handed alpha
Helix 42
42
D
115 119Right-handed 310
Helix 43
43
D
126 138Right-handed alpha
Helix 44
44
D
139 143Right-handed 310
Helix 45
45
E
16 22Right-handed alpha
Helix 46
46
E
24 36Right-handed alpha
Helix 47
47
E
48 56Right-handed alpha
Helix 48
48
E
57 60Right-handed 310
Helix 49
49
E
64 73Right-handed alpha
Helix 50
50
E
86 96Right-handed alpha
Helix 51
51
E
99 103Right-handed 310
Helix 52
52
E
107 113Right-handed alpha
Helix 53
53
E
115 119Right-handed 310
Helix 54
54
E
126 138Right-handed alpha
Helix 55
55
E
139 143Right-handed 310
Helix 56
56
F
16 22Right-handed alpha
Helix 57
57
F
24 36Right-handed alpha
Helix 58
58
F
48 56Right-handed alpha
Helix 59
59
F
57 60Right-handed 310
Helix 60
60
F
64 73Right-handed alpha
Helix 61
61
F
86 96Right-handed alpha
Helix 62
62
F
99 103Right-handed 310
Helix 63
63
F
107 113Right-handed alpha
Helix 64
64
F
115 119Right-handed 310
Helix 65
65
F
126 138Right-handed alpha
Helix 66
66
F
139 143Right-handed 310
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There are 6 sheets in PDB entry 1S5Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 45first strand
Strand 2
A
77 83anti-parallel
Strand 3
A
10 15anti-parallel
Strand 4
A
121 123anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 45first strand
Strand 2
B
77 83anti-parallel
Strand 3
B
10 15anti-parallel
Strand 4
B
121 123anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 45first strand
Strand 2
C
77 83anti-parallel
Strand 3
C
10 15anti-parallel
Strand 4
C
121 123anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 45first strand
Strand 2
D
77 83anti-parallel
Strand 3
D
10 15anti-parallel
Strand 4
D
121 123anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
38 45first strand
Strand 2
E
77 83anti-parallel
Strand 3
E
10 15anti-parallel
Strand 4
E
121 123anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
38 45first strand
Strand 2
F
77 83anti-parallel
Strand 3
F
10 15anti-parallel
Strand 4
F
121 123anti-parallel
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