Analysis of interatomic Contacts of Structural Units in PDB entry:
1S80


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1S80 entry

There are 6 chains in PDB entry 1S80 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0VAL 240
B
 SER 0VAL 240
C
 SER 0VAL 240
D
 SER 0VAL 240
E
 SER 0VAL 240
F
 SER 0VAL 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 1S80. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
0 20Right-handed alpha
Helix 2
2
A
23 31Right-handed alpha
Helix 3
3
A
36 50Right-handed alpha
Helix 4
4
A
55 69Right-handed alpha
Helix 5
5
A
71 88Right-handed alpha
Helix 6
6
A
94 101Right-handed alpha
Helix 7
7
A
101 119Right-handed alpha
Helix 8
8
A
121 136Right-handed alpha
Helix 9
9
B
0 20Right-handed alpha
Helix 10
10
B
23 31Right-handed alpha
Helix 11
11
B
36 50Right-handed alpha
Helix 12
12
B
55 70Right-handed alpha
Helix 13
13
B
71 88Right-handed alpha
Helix 14
14
B
94 101Right-handed alpha
Helix 15
15
B
101 119Right-handed alpha
Helix 16
16
B
121 137Right-handed alpha
Helix 17
17
C
0 20Right-handed alpha
Helix 18
18
C
23 31Right-handed alpha
Helix 19
19
C
36 50Right-handed alpha
Helix 20
20
C
55 70Right-handed alpha
Helix 21
21
C
71 88Right-handed alpha
Helix 22
22
C
94 101Right-handed alpha
Helix 23
23
C
101 119Right-handed alpha
Helix 24
24
C
121 137Right-handed alpha
Helix 25
25
D
0 20Right-handed alpha
Helix 26
26
D
23 31Right-handed alpha
Helix 27
27
D
36 50Right-handed alpha
Helix 28
28
D
55 70Right-handed alpha
Helix 29
29
D
71 88Right-handed alpha
Helix 30
30
D
94 101Right-handed alpha
Helix 31
31
D
101 119Right-handed alpha
Helix 32
32
D
121 137Right-handed alpha
Helix 33
33
E
0 20Right-handed alpha
Helix 34
34
E
23 31Right-handed alpha
Helix 35
35
E
36 49Right-handed alpha
Helix 36
36
E
55 70Right-handed alpha
Helix 37
37
E
71 88Right-handed alpha
Helix 38
38
E
94 101Right-handed alpha
Helix 39
39
E
101 119Right-handed alpha
Helix 40
40
E
121 137Right-handed alpha
Helix 41
41
F
0 20Right-handed alpha
Helix 42
42
F
23 31Right-handed alpha
Helix 43
43
F
36 50Right-handed alpha
Helix 44
44
F
55 69Right-handed alpha
Helix 45
45
F
71 88Right-handed alpha
Helix 46
46
F
94 101Right-handed alpha
Helix 47
47
F
101 119Right-handed alpha
Helix 48
48
F
121 137Right-handed alpha
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There are 18 sheets in PDB entry 1S80. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 140first strand
Strand 2
A
158 160parallel
Strand 3
A
177 178parallel
Strand 4
A
203 204parallel
Strand 5
A
221 222parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 146first strand
Strand 2
A
165 166parallel
Strand 3
A
191 192parallel
Strand 4
A
209 210parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
231 233parallel
Strand 3
A
238 239anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 140first strand
Strand 2
B
159 160parallel
Strand 3
B
177 178parallel
Strand 4
B
203 204parallel
Strand 5
B
221 222parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 146first strand
Strand 2
B
165 166parallel
Strand 3
B
191 192parallel
Strand 4
B
209 210parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 216first strand
Strand 2
B
231 233parallel
Strand 3
B
238 239anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
139 140first strand
Strand 2
C
159 160parallel
Strand 3
C
177 178parallel
Strand 4
C
203 204parallel
Strand 5
C
221 222parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
145 146first strand
Strand 2
C
165 166parallel
Strand 3
C
191 192parallel
Strand 4
C
209 210parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
215 216first strand
Strand 2
C
231 233parallel
Strand 3
C
238 240anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
138 140first strand
Strand 2
D
158 160parallel
Strand 3
D
177 178parallel
Strand 4
D
203 204parallel
Strand 5
D
221 222parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
145 146first strand
Strand 2
D
165 166parallel
Strand 3
D
191 192parallel
Strand 4
D
209 210parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
215 216first strand
Strand 2
D
231 233parallel
Strand 3
D
238 239anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
139 140first strand
Strand 2
E
159 160parallel
Strand 3
E
177 178parallel
Strand 4
E
203 204parallel
Strand 5
E
221 222parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
145 146first strand
Strand 2
E
165 166parallel
Strand 3
E
191 192parallel
Strand 4
E
209 210parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
215 216first strand
Strand 2
E
231 233parallel
Strand 3
E
238 240anti-parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
139 140first strand
Strand 2
F
159 160parallel
Strand 3
F
177 178parallel
Strand 4
F
203 204parallel
Strand 5
F
221 222parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
145 146first strand
Strand 2
F
165 166parallel
Strand 3
F
191 192parallel
Strand 4
F
209 210parallel
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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
215 216first strand
Strand 2
F
231 233parallel
Strand 3
F
238 240anti-parallel
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