Analysis of interatomic Contacts of Structural Units in PDB entry:
1S99


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1S99 entry

There are 2 chains in PDB entry 1S99 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 9ARG 197
B
 ARG 9PRO 192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1S99. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 35Right-handed alpha
Helix 2
2
A
54 71Right-handed alpha
Helix 3
3
A
128 143Right-handed alpha
Helix 4
4
A
159 178Right-handed alpha
Helix 5
5
B
23 35Right-handed alpha
Helix 6
6
B
54 71Right-handed alpha
Helix 7
7
B
128 143Right-handed alpha
Helix 8
8
B
159 178Right-handed alpha
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There are 2 sheets in PDB entry 1S99. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 44first strand
Strand 2
A
49 53anti-parallel
Strand 3
A
11 19anti-parallel
Strand 4
A
76 84anti-parallel
Strand 5
A
181 189anti-parallel
Strand 6
A
117 123anti-parallel
Strand 7
A
153 156anti-parallel
Strand 8
A
146 150anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 44first strand
Strand 2
B
49 53anti-parallel
Strand 3
B
11 19anti-parallel
Strand 4
B
76 84anti-parallel
Strand 5
B
181 189anti-parallel
Strand 6
B
117 123anti-parallel
Strand 7
B
153 156anti-parallel
Strand 8
B
146 150anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il