Analysis of interatomic Contacts of Structural Units in PDB entry:
1SC6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SC6 entry

There are 4 chains in PDB entry 1SC6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 7TYR 410
B
 GLU 7TYR 410
C
 ASP 9TYR 410
D
 GLU 7TYR 410
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 1SC6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 30Right-handed alpha
Helix 2
2
A
43 51Right-handed alpha
Helix 3
3
A
66 73Right-handed alpha
Helix 4
4
A
90 97Right-handed alpha
Helix 5
5
A
108 126Right-handed alpha
Helix 6
6
A
126 137Right-handed alpha
Helix 7
7
A
160 173Right-handed alpha
Helix 8
8
A
196 204Right-handed alpha
Helix 9
9
A
222 229Right-handed alpha
Helix 10
10
A
245 255Right-handed alpha
Helix 11
11
A
278 282Right-handed 310
Helix 12
12
A
297 319Right-handed alpha
Helix 13
13
A
349 361Right-handed alpha
Helix 14
14
A
386 399Right-handed alpha
Helix 15
15
B
20 30Right-handed alpha
Helix 16
16
B
43 52Right-handed alpha
Helix 17
17
B
66 73Right-handed alpha
Helix 18
18
B
90 97Right-handed alpha
Helix 19
19
B
108 126Right-handed alpha
Helix 20
20
B
126 136Right-handed alpha
Helix 21
21
B
160 173Right-handed alpha
Helix 22
22
B
196 204Right-handed alpha
Helix 23
23
B
222 229Right-handed alpha
Helix 24
24
B
245 255Right-handed alpha
Helix 25
25
B
300 319Right-handed alpha
Helix 26
26
B
349 361Right-handed alpha
Helix 27
27
B
386 399Right-handed alpha
Helix 28
28
C
20 30Right-handed alpha
Helix 29
29
C
43 52Right-handed alpha
Helix 30
30
C
66 73Right-handed alpha
Helix 31
31
C
90 97Right-handed alpha
Helix 32
32
C
108 125Right-handed alpha
Helix 33
33
C
126 136Right-handed alpha
Helix 34
34
C
160 173Right-handed alpha
Helix 35
35
C
196 204Right-handed alpha
Helix 36
36
C
222 229Right-handed alpha
Helix 37
37
C
245 255Right-handed alpha
Helix 38
38
C
300 319Right-handed alpha
Helix 39
39
C
349 361Right-handed alpha
Helix 40
40
C
386 399Right-handed alpha
Helix 41
41
D
20 30Right-handed alpha
Helix 42
42
D
43 52Right-handed alpha
Helix 43
43
D
66 73Right-handed alpha
Helix 44
44
D
90 97Right-handed alpha
Helix 45
45
D
108 125Right-handed alpha
Helix 46
46
D
126 135Right-handed alpha
Helix 47
47
D
160 173Right-handed alpha
Helix 48
48
D
196 204Right-handed alpha
Helix 49
49
D
222 229Right-handed alpha
Helix 50
50
D
245 255Right-handed alpha
Helix 51
51
D
278 282Right-handed 310
Helix 52
52
D
299 319Right-handed alpha
Helix 53
53
D
349 360Right-handed alpha
Helix 54
54
D
386 400Right-handed alpha
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There are 10 sheets in PDB entry 1SC6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 37first strand
Strand 2
A
13 15parallel
Strand 3
A
56 59parallel
Strand 4
A
78 81parallel
Strand 5
A
101 102parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
176 180parallel
Strand 3
A
153 157parallel
Strand 4
A
206 209parallel
Strand 5
A
233 237parallel
Strand 6
A
258 264parallel
Strand 7
A
287 290parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 410first strand
Strand 2
A
338 345anti-parallel
Strand 3
A
376 384anti-parallel
Strand 4
A
364 372anti-parallel
Strand 5
C
365 372anti-parallel
Strand 6
C
376 383anti-parallel
Strand 7
C
338 345anti-parallel
Strand 8
C
403 410anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 37first strand
Strand 2
B
13 15parallel
Strand 3
B
56 59parallel
Strand 4
B
78 81parallel
Strand 5
B
101 102parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 193first strand
Strand 2
B
176 180parallel
Strand 3
B
153 157parallel
Strand 4
B
206 209parallel
Strand 5
B
233 237parallel
Strand 6
B
258 263parallel
Strand 7
B
287 289parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
403 410first strand
Strand 2
B
338 345anti-parallel
Strand 3
B
376 383anti-parallel
Strand 4
B
365 373anti-parallel
Strand 5
D
364 372anti-parallel
Strand 6
D
376 384anti-parallel
Strand 7
D
338 345anti-parallel
Strand 8
D
403 410anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 37first strand
Strand 2
C
13 15parallel
Strand 3
C
56 59parallel
Strand 4
C
78 81parallel
Strand 5
C
101 102parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
192 193first strand
Strand 2
C
176 180parallel
Strand 3
C
153 157parallel
Strand 4
C
206 209parallel
Strand 5
C
233 237parallel
Strand 6
C
258 264parallel
Strand 7
C
287 290parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 37first strand
Strand 2
D
13 15parallel
Strand 3
D
56 59parallel
Strand 4
D
78 81parallel
Strand 5
D
101 102parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
192 193first strand
Strand 2
D
176 180parallel
Strand 3
D
153 157parallel
Strand 4
D
206 209parallel
Strand 5
D
233 237parallel
Strand 6
D
258 264parallel
Strand 7
D
287 290parallel
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