Analysis of interatomic Contacts of Structural Units in PDB entry:
1SF8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SF8 entry

There are 8 chains in PDB entry 1SF8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 510SER 624
B
 SER 510SER 624
C
 HIS 505SER 624
D
 SER 510SER 624
E
 SER 510SER 624
F
 SER 510SER 624
G
 HIS 504SER 624
H
 GLY 509SER 624
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 47 helices in PDB entry 1SF8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
510 520Right-handed alpha
Helix 2
2
A
521 523Right-handed 310
Helix 3
3
A
547 556Right-handed alpha
Helix 4
4
A
574 583Right-handed alpha
Helix 5
5
A
585 606Right-handed alpha
Helix 6
6
A
610 624Right-handed alpha
Helix 7
7
B
510 520Right-handed alpha
Helix 8
8
B
521 523Right-handed 310
Helix 9
9
B
547 558Right-handed alpha
Helix 10
10
B
574 582Right-handed alpha
Helix 11
11
B
585 606Right-handed alpha
Helix 12
12
B
610 624Right-handed alpha
Helix 13
13
C
510 515Right-handed alpha
Helix 14
14
C
515 520Right-handed alpha
Helix 15
15
C
547 557Right-handed alpha
Helix 16
16
C
574 582Right-handed alpha
Helix 17
17
C
588 606Right-handed alpha
Helix 18
18
C
610 624Right-handed alpha
Helix 19
19
D
511 520Right-handed alpha
Helix 20
20
D
521 523Right-handed 310
Helix 21
21
D
547 557Right-handed alpha
Helix 22
22
D
574 582Right-handed alpha
Helix 23
23
D
585 606Right-handed alpha
Helix 24
24
D
610 624Right-handed alpha
Helix 25
25
E
510 520Right-handed alpha
Helix 26
26
E
521 523Right-handed 310
Helix 27
27
E
547 557Right-handed alpha
Helix 28
28
E
574 583Right-handed alpha
Helix 29
29
E
585 606Right-handed alpha
Helix 30
30
E
610 624Right-handed alpha
Helix 31
31
F
511 520Right-handed alpha
Helix 32
32
F
547 557Right-handed alpha
Helix 33
33
F
574 580Right-handed alpha
Helix 34
34
F
585 606Right-handed alpha
Helix 35
35
F
610 624Right-handed alpha
Helix 36
36
G
510 520Right-handed alpha
Helix 37
37
G
521 523Right-handed 310
Helix 38
38
G
547 557Right-handed alpha
Helix 39
39
G
574 583Right-handed alpha
Helix 40
40
G
585 606Right-handed alpha
Helix 41
41
G
610 624Right-handed alpha
Helix 42
42
H
509 520Right-handed alpha
Helix 43
43
H
521 523Right-handed 310
Helix 44
44
H
547 557Right-handed alpha
Helix 45
45
H
574 583Right-handed alpha
Helix 46
46
H
585 606Right-handed alpha
Helix 47
47
H
610 624Right-handed alpha
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There are 8 sheets in PDB entry 1SF8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
525 528first strand
Strand 2
A
567 570parallel
Strand 3
A
537 540anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
525 528first strand
Strand 2
B
567 570parallel
Strand 3
B
537 540anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
523 528first strand
Strand 2
C
566 570parallel
Strand 3
C
537 540anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
525 528first strand
Strand 2
D
567 570parallel
Strand 3
D
537 540anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
525 528first strand
Strand 2
E
567 570parallel
Strand 3
E
537 540anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
525 528first strand
Strand 2
F
567 570parallel
Strand 3
F
537 540anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
525 528first strand
Strand 2
G
567 570parallel
Strand 3
G
537 540anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
525 528first strand
Strand 2
H
567 570parallel
Strand 3
H
537 540anti-parallel
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