Analysis of interatomic Contacts of Structural Units in PDB entry:
1SFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SFZ entry

There is 1 chain in PDB entry 1SFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 32VAL 739
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 1SFZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 39Right-handed alpha
Helix 2
2
A
45 50Right-handed alpha
Helix 3
3
A
63 71Right-handed alpha
Helix 4
4
A
72 86Right-handed alpha
Helix 5
5
A
93 97Right-handed 310
Helix 6
6
A
98 112Right-handed alpha
Helix 7
7
A
125 129Right-handed 310
Helix 8
8
A
131 139Right-handed 310
Helix 9
9
A
140 156Right-handed alpha
Helix 10
10
A
157 159Right-handed 310
Helix 11
11
A
160 177Right-handed alpha
Helix 12
12
A
234 238Right-handed 310
Helix 13
13
A
240 255Right-handed alpha
Helix 14
14
A
258 270Right-handed alpha
Helix 15
15
A
280 284Right-handed 310
Helix 16
16
A
292 296Right-handed 310
Helix 17
17
A
308 312Right-handed 310
Helix 18
18
A
330 339Right-handed alpha
Helix 19
19
A
378 387Right-handed alpha
Helix 20
20
A
387 400Right-handed alpha
Helix 21
21
A
400 418Right-handed alpha
Helix 22
22
A
422 426Right-handed 310
Helix 23
23
A
436 440Right-handed 310
Helix 24
24
A
451 465Right-handed alpha
Helix 25
25
A
468 481Right-handed alpha
Helix 26
26
A
495 499Right-handed 310
Helix 27
27
A
501 509Right-handed 310
Helix 28
28
A
512 532Right-handed alpha
Helix 29
29
A
539 560Right-handed alpha
Helix 30
30
A
580 585Right-handed alpha
Helix 31
31
A
586 588Right-handed 310
Helix 32
32
A
593 596Right-handed 310
Helix 33
33
A
605 618Right-handed alpha
Helix 34
34
A
620 635Right-handed alpha
Helix 35
35
A
637 641Right-handed 310
Helix 36
36
A
655 663Right-handed alpha
Helix 37
37
A
693 701Right-handed alpha
Helix 38
38
A
701 713Right-handed alpha
Helix 39
39
A
716 733Right-handed alpha
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There are 4 sheets in PDB entry 1SFZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 211first strand
Strand 2
A
215 216anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 345first strand
Strand 2
A
351 355anti-parallel
Strand 3
A
376 377anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 592first strand
Strand 2
A
597 598anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
667 670first strand
Strand 2
A
677 681anti-parallel
Strand 3
A
687 692anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il