Analysis of interatomic Contacts of Structural Units in PDB entry:
1SGJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SGJ entry

There are 3 chains in PDB entry 1SGJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4GLY 234
B
 PRO 4GLY 234
C
 PRO 4GLY 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 1SGJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 25Right-handed alpha
Helix 2
2
A
44 66Right-handed alpha
Helix 3
3
A
82 87Right-handed alpha
Helix 4
4
A
88 90Right-handed 310
Helix 5
5
A
104 118Right-handed alpha
Helix 6
6
A
130 136Right-handed alpha
Helix 7
7
A
136 142Right-handed alpha
Helix 8
8
A
152 161Right-handed alpha
Helix 9
9
A
168 170Right-handed 310
Helix 10
10
A
171 186Right-handed alpha
Helix 11
11
A
199 213Right-handed alpha
Helix 12
12
A
222 231Right-handed alpha
Helix 13
13
B
18 25Right-handed alpha
Helix 14
14
B
26 29Right-handed 310
Helix 15
15
B
44 66Right-handed alpha
Helix 16
16
B
82 87Right-handed alpha
Helix 17
17
B
88 90Right-handed 310
Helix 18
18
B
104 118Right-handed alpha
Helix 19
19
B
130 136Right-handed alpha
Helix 20
20
B
136 142Right-handed alpha
Helix 21
21
B
152 161Right-handed alpha
Helix 22
22
B
168 170Right-handed 310
Helix 23
23
B
171 186Right-handed alpha
Helix 24
24
B
199 213Right-handed alpha
Helix 25
25
B
222 233Right-handed alpha
Helix 26
26
C
18 25Right-handed alpha
Helix 27
27
C
26 29Right-handed 310
Helix 28
28
C
44 50Right-handed alpha
Helix 29
29
C
50 66Right-handed alpha
Helix 30
30
C
82 88Right-handed alpha
Helix 31
31
C
104 118Right-handed alpha
Helix 32
32
C
130 136Right-handed alpha
Helix 33
33
C
136 142Right-handed alpha
Helix 34
34
C
152 161Right-handed alpha
Helix 35
35
C
168 170Right-handed 310
Helix 36
36
C
171 186Right-handed alpha
Helix 37
37
C
199 213Right-handed alpha
Helix 38
38
C
222 233Right-handed alpha
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There are 3 sheets in PDB entry 1SGJ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 15first strand
Strand 2
A
32 36parallel
Strand 3
A
70 74parallel
Strand 4
A
96 99parallel
Strand 5
A
124 128parallel
Strand 6
A
146 151parallel
Strand 7
A
188 191parallel
Strand 8
A
217 220parallel
Strand 9
A
10 15parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 15first strand
Strand 2
B
32 36parallel
Strand 3
B
70 74parallel
Strand 4
B
96 99parallel
Strand 5
B
124 128parallel
Strand 6
B
146 151parallel
Strand 7
B
188 191parallel
Strand 8
B
217 220parallel
Strand 9
B
10 15parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 15first strand
Strand 2
C
32 36parallel
Strand 3
C
70 74parallel
Strand 4
C
96 99parallel
Strand 5
C
124 128parallel
Strand 6
C
146 151parallel
Strand 7
C
188 191parallel
Strand 8
C
217 220parallel
Strand 9
C
10 15parallel
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