Analysis of interatomic Contacts of Structural Units in PDB entry:
1SIG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SIG entry

There is 1 chain in PDB entry 1SIG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 113GLN 446
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1SIG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
116 136Right-handed alpha
Helix 2
2
A
138 148Right-handed alpha
Helix 3
3
A
158 160Right-handed 310
Helix 4
4
A
214 234Right-handed alpha
Helix 5
5
A
243 258Right-handed alpha
Helix 6
6
A
263 292Right-handed alpha
Helix 7
7
A
299 306Right-handed alpha
Helix 8
8
A
313 315Right-handed 310
Helix 9
9
A
317 322Right-handed alpha
Helix 10
10
A
325 331Right-handed alpha
Helix 11
11
A
334 351Right-handed alpha
Helix 12
12
A
355 393Right-handed alpha
Helix 13
13
A
401 418Right-handed alpha
Helix 14
14
A
427 444Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1SIG.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
162 165first strand
Strand 2
A
259 261anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il