Analysis of interatomic Contacts of Structural Units in PDB entry:
1SLY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SLY entry

There is 1 chain in PDB entry 1SLY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1TYR 618
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 1SLY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
U1
A
3 18Right-handed alpha
Helix 2
U2
A
22 28Right-handed alpha
Helix 3
U3
A
38 48Right-handed alpha
Helix 4
U4
A
55 64Right-handed alpha
Helix 5
U5
A
69 84Right-handed alpha
Helix 6
U6
A
88 94Right-handed alpha
Helix 7
U7
A
102 114Right-handed alpha
Helix 8
U8
A
118 129Right-handed alpha
Helix 9
U9
A
139 149Right-handed alpha
Helix 10
U10
A
154 165Right-handed alpha
Helix 11
U11
A
170 178Right-handed alpha
Helix 12
U12
A
189 196Right-handed alpha
Helix 13
U13
A
201 205Right-handed alpha
Helix 14
U14
A
212 228Right-handed alpha
Helix 15
U15
A
230 243Right-handed alpha
Helix 16
U16
A
248 260Right-handed alpha
Helix 17
U17
A
269 280Right-handed alpha
Helix 18
U18
A
285 296Right-handed alpha
Helix 19
U19
A
301 308Right-handed alpha
Helix 20
U20
A
319 331Right-handed alpha
Helix 21
U21
A
335 345Right-handed alpha
Helix 22
U22
A
351 359Right-handed alpha
Helix 23
UL
A
377 380Right-handed alpha
Helix 24
L1
A
383 393Right-handed alpha
Helix 25
L2
A
397 408Right-handed alpha
Helix 26
L3
A
413 425Right-handed alpha
Helix 27
L4
A
429 438Right-handed alpha
Helix 28
C1
A
454 459Right-handed alpha
Helix 29
C2
A
468 479Right-handed alpha
Helix 30
C3
A
499 508Right-handed alpha
Helix 31
C4
A
523 539Right-handed alpha
Helix 32
C5
A
545 554Right-handed alpha
Helix 33
C6
A
556 566Right-handed alpha
Helix 34
C7
A
572 577Right-handed alpha
Helix 35
C8
A
582 602Right-handed alpha
Helix 36
C9
A
611 615Right-handed alpha
Back to top of page

There is 1 sheet (BC1) in PDB entry 1SLY.

There are 3 strands in BC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 487first strand
Strand 2
A
490 493anti-parallel
Strand 3
A
495 497anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il