Analysis of interatomic Contacts of Structural Units in PDB entry:
1SLZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SLZ entry

There is 1 chain in PDB entry 1SLZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 62ALA 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 1SLZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
109 115Right-handed alpha
Helix 2
2
A
116 122Right-handed alpha
Helix 3
3
A
156 163Right-handed alpha
Helix 4
4
A
163 174Right-handed alpha
Helix 5
5
A
186 199Right-handed alpha
Helix 6
6
A
219 231Right-handed alpha
Helix 7
7
A
235 240Right-handed alpha
Helix 8
8
A
246 251Right-handed alpha
Helix 9
9
A
256 264Right-handed alpha
Helix 10
10
A
283 308Right-handed alpha
Helix 11
11
A
323 343Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 1SLZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
69 75first strand
Strand 2
A
80 87anti-parallel
Strand 3
A
127 131anti-parallel
Strand 4
A
95 99parallel
Strand 5
A
180 185parallel
Strand 6
A
203 209parallel
Strand 7
A
266 270parallel
Strand 8
A
312 315parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
146 147first strand
Strand 2
A
152 153anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il