Analysis of interatomic Contacts of Structural Units in PDB entry:
1SOU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SOU entry

There is 1 chain in PDB entry 1SOU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 194
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1SOU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 15Right-handed alpha
Helix 2
2
A
18 36Right-handed alpha
Helix 3
3
A
36 42Right-handed alpha
Helix 4
4
A
57 59Right-handed 310
Helix 5
5
A
60 68Right-handed alpha
Helix 6
6
A
108 112Right-handed 310
Helix 7
7
A
135 143Right-handed alpha
Helix 8
8
A
152 156Right-handed 310
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There are 2 sheets in PDB entry 1SOU. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 107first strand
Strand 2
A
80 85anti-parallel
Strand 3
A
69 75anti-parallel
Strand 4
A
44 47parallel
Strand 5
A
114 117parallel
Strand 6
A
146 150parallel
Strand 7
A
171 173parallel
Strand 8
A
178 180anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 93first strand
Strand 2
A
99 100anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il