Analysis of interatomic Contacts of Structural Units in PDB entry:
1SUU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SUU entry

There is 1 chain in PDB entry 1SUU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 506ILE 809
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 1SUU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
524 526Right-handed 310
Helix 2
2
A
574 576Right-handed 310
Helix 3
3
A
587 591Right-handed 310
Helix 4
4
A
630 633Right-handed 310
Helix 5
5
A
678 680Right-handed 310
Helix 6
6
A
728 730Right-handed 310
Helix 7
7
A
780 782Right-handed 310
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There are 6 sheets in PDB entry 1SUU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
518 522first strand
Strand 2
A
507 513anti-parallel
Strand 3
A
547 554anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 537first strand
Strand 2
A
773 778anti-parallel
Strand 3
A
764 769anti-parallel
Strand 4
A
802 807anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
600 606first strand
Strand 2
A
558 563anti-parallel
Strand 3
A
567 572anti-parallel
Strand 4
A
640 641anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
651 657first strand
Strand 2
A
614 619anti-parallel
Strand 3
A
623 628anti-parallel
Strand 4
A
690 691anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
701 706first strand
Strand 2
A
662 667anti-parallel
Strand 3
A
671 676anti-parallel
Strand 4
A
740 741anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
753 759first strand
Strand 2
A
712 717anti-parallel
Strand 3
A
721 726anti-parallel
Strand 4
A
792 793anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il