Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 1SUY entry
There are 4 chains in PDB entry 1SUY
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
ALA 1 | VAL 107 |
B
|
ALA 201 | VAL 307 |
C
|
ALA 401 | GLU 434 |
D
|
ALA 501 | GLU 534 |
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There are 14
helices in PDB entry 1SUY. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 1 |
5 | Right-handed 310 |
| Helix 2 |
2 | A
| 6 |
28 | Right-handed alpha |
| Helix 3 |
3 | A
| 34 |
49 | Right-handed alpha |
| Helix 4 |
4 | A
| 52 |
74 | Right-handed alpha |
| Helix 5 |
5 | A
| 77 |
80 | Right-handed 310 |
| Helix 6 |
6 | A
| 81 |
102 | Right-handed alpha |
| Helix 7 |
7 | B
| 201 |
205 | Right-handed 310 |
| Helix 8 |
8 | B
| 206 |
228 | Right-handed alpha |
| Helix 9 |
9 | B
| 234 |
249 | Right-handed alpha |
| Helix 10 |
10 | B
| 252 |
274 | Right-handed alpha |
| Helix 11 |
11 | B
| 277 |
280 | Right-handed 310 |
| Helix 12 |
12 | B
| 281 |
302 | Right-handed alpha |
| Helix 13 |
13 | C
| 421 |
425 | Right-handed 310 |
| Helix 14 |
14 | D
| 521 |
525 | Right-handed 310 |
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There are no sheets in PDB entry
1SUY
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il