Analysis of interatomic Contacts of Structural Units in PDB entry:
1SVO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SVO entry

There are 2 chains in PDB entry 1SVO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 266ASP 627
B
 LYS 266ASP 627
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 1SVO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
269 281Right-handed alpha
Helix 2
2
A
284 293Right-handed alpha
Helix 3
3
A
294 297Right-handed 310
Helix 4
4
A
302 307Right-handed alpha
Helix 5
5
A
310 315Right-handed alpha
Helix 6
6
A
316 328Right-handed alpha
Helix 7
7
A
332 355Right-handed alpha
Helix 8
8
A
356 376Right-handed alpha
Helix 9
9
A
383 395Right-handed alpha
Helix 10
10
A
400 415Right-handed alpha
Helix 11
11
A
431 444Right-handed alpha
Helix 12
12
A
456 462Right-handed alpha
Helix 13
13
A
463 465Right-handed 310
Helix 14
14
A
489 495Right-handed alpha
Helix 15
15
A
497 503Right-handed alpha
Helix 16
16
A
534 539Right-handed alpha
Helix 17
17
A
550 559Right-handed alpha
Helix 18
18
A
561 566Right-handed alpha
Helix 19
19
A
571 583Right-handed alpha
Helix 20
20
A
584 588Right-handed 310
Helix 21
21
A
589 607Right-handed alpha
Helix 22
22
A
608 621Right-handed alpha
Helix 23
23
B
269 279Right-handed alpha
Helix 24
24
B
284 293Right-handed alpha
Helix 25
25
B
294 296Right-handed 310
Helix 26
26
B
302 307Right-handed alpha
Helix 27
27
B
310 315Right-handed alpha
Helix 28
28
B
316 328Right-handed alpha
Helix 29
29
B
332 355Right-handed alpha
Helix 30
30
B
356 376Right-handed alpha
Helix 31
31
B
383 395Right-handed alpha
Helix 32
32
B
400 415Right-handed alpha
Helix 33
33
B
431 444Right-handed alpha
Helix 34
34
B
456 462Right-handed alpha
Helix 35
35
B
463 465Right-handed 310
Helix 36
36
B
489 496Right-handed alpha
Helix 37
37
B
497 502Right-handed alpha
Helix 38
38
B
534 539Right-handed alpha
Helix 39
39
B
550 559Right-handed alpha
Helix 40
40
B
561 566Right-handed alpha
Helix 41
41
B
571 583Right-handed alpha
Helix 42
42
B
584 588Right-handed 310
Helix 43
43
B
589 607Right-handed alpha
Helix 44
44
B
608 621Right-handed alpha
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There are 4 sheets in PDB entry 1SVO. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
445 448first strand
Strand 2
A
469 475parallel
Strand 3
A
524 528parallel
Strand 4
A
421 425parallel
Strand 5
A
543 546parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 511first strand
Strand 2
A
514 519anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
446 448first strand
Strand 2
B
470 475parallel
Strand 3
B
524 528parallel
Strand 4
B
421 425parallel
Strand 5
B
543 546parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
507 511first strand
Strand 2
B
514 519anti-parallel
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