Analysis of interatomic Contacts of Structural Units in PDB entry:
1SZS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1SZS entry

There are 4 chains in PDB entry 1SZS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2GLN 426
B
 ASN 2GLN 426
C
 ASN 2GLN 426
D
 ASN 2GLN 426
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 1SZS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 15Right-handed alpha
Helix 2
2
A
47 52Right-handed alpha
Helix 3
3
A
59 70Right-handed alpha
Helix 4
4
A
83 97Right-handed alpha
Helix 5
5
A
110 127Right-handed alpha
Helix 6
6
A
142 149Right-handed alpha
Helix 7
7
A
173 177Right-handed 310
Helix 8
8
A
179 194Right-handed alpha
Helix 9
9
A
196 198Right-handed 310
Helix 10
10
A
218 233Right-handed alpha
Helix 11
11
A
252 257Right-handed 310
Helix 12
12
A
267 272Right-handed 310
Helix 13
13
A
283 287Right-handed alpha
Helix 14
14
A
301 318Right-handed alpha
Helix 15
15
A
319 342Right-handed alpha
Helix 16
16
A
361 364Right-handed 310
Helix 17
17
A
369 383Right-handed alpha
Helix 18
18
A
406 426Right-handed alpha
Helix 19
19
B
3 15Right-handed alpha
Helix 20
20
B
47 52Right-handed alpha
Helix 21
21
B
59 71Right-handed alpha
Helix 22
22
B
83 97Right-handed alpha
Helix 23
23
B
110 127Right-handed alpha
Helix 24
24
B
142 149Right-handed alpha
Helix 25
25
B
173 177Right-handed 310
Helix 26
26
B
179 194Right-handed alpha
Helix 27
27
B
196 198Right-handed 310
Helix 28
28
B
218 233Right-handed alpha
Helix 29
29
B
252 257Right-handed 310
Helix 30
30
B
267 272Right-handed 310
Helix 31
31
B
283 287Right-handed alpha
Helix 32
32
B
301 318Right-handed alpha
Helix 33
33
B
319 341Right-handed alpha
Helix 34
34
B
361 364Right-handed 310
Helix 35
35
B
369 383Right-handed alpha
Helix 36
36
B
406 424Right-handed alpha
Helix 37
37
C
3 15Right-handed alpha
Helix 38
38
C
47 52Right-handed alpha
Helix 39
39
C
59 71Right-handed alpha
Helix 40
40
C
83 97Right-handed alpha
Helix 41
41
C
110 127Right-handed alpha
Helix 42
42
C
142 149Right-handed alpha
Helix 43
43
C
173 177Right-handed 310
Helix 44
44
C
179 194Right-handed alpha
Helix 45
45
C
196 198Right-handed 310
Helix 46
46
C
218 233Right-handed alpha
Helix 47
47
C
253 258Right-handed alpha
Helix 48
48
C
267 272Right-handed 310
Helix 49
49
C
283 287Right-handed alpha
Helix 50
50
C
301 318Right-handed alpha
Helix 51
51
C
319 342Right-handed alpha
Helix 52
52
C
361 364Right-handed 310
Helix 53
53
C
369 383Right-handed alpha
Helix 54
54
C
406 426Right-handed alpha
Helix 55
55
D
3 15Right-handed alpha
Helix 56
56
D
47 52Right-handed alpha
Helix 57
57
D
59 71Right-handed alpha
Helix 58
58
D
83 97Right-handed alpha
Helix 59
59
D
110 127Right-handed alpha
Helix 60
60
D
142 149Right-handed alpha
Helix 61
61
D
173 177Right-handed 310
Helix 62
62
D
179 194Right-handed alpha
Helix 63
63
D
196 198Right-handed 310
Helix 64
64
D
218 233Right-handed alpha
Helix 65
65
D
252 258Right-handed 310
Helix 66
66
D
267 272Right-handed 310
Helix 67
67
D
283 287Right-handed alpha
Helix 68
68
D
301 318Right-handed alpha
Helix 69
69
D
319 340Right-handed alpha
Helix 70
70
D
361 364Right-handed 310
Helix 71
71
D
369 383Right-handed alpha
Helix 72
72
D
406 426Right-handed alpha
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There are 15 sheets in PDB entry 1SZS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 386first strand
Strand 2
A
42 45parallel
Strand 3
A
34 37anti-parallel
Strand 4
A
23 31anti-parallel
Strand 5
B
81 82parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 82first strand
Strand 2
B
23 31parallel
Strand 3
B
34 37anti-parallel
Strand 4
B
42 45anti-parallel
Strand 5
B
385 386parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 108first strand
Strand 2
A
277 282anti-parallel
Strand 3
A
263 266anti-parallel
Strand 4
A
235 239parallel
Strand 5
A
200 205parallel
Strand 6
A
130 134parallel
Strand 7
A
166 169parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 349first strand
Strand 2
A
355 359anti-parallel
Strand 3
A
396 399anti-parallel
Strand 4
A
388 390anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 108first strand
Strand 2
B
277 282anti-parallel
Strand 3
B
263 266anti-parallel
Strand 4
B
235 239parallel
Strand 5
B
200 205parallel
Strand 6
B
130 134parallel
Strand 7
B
166 169parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 209first strand
Strand 2
B
215 216anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 351first strand
Strand 2
B
354 359anti-parallel
Strand 3
B
396 399anti-parallel
Strand 4
B
388 390anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
385 386first strand
Strand 2
C
42 45parallel
Strand 3
C
34 37anti-parallel
Strand 4
C
23 31anti-parallel
Strand 5
D
81 82parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 82first strand
Strand 2
D
23 31parallel
Strand 3
D
34 37anti-parallel
Strand 4
D
42 45anti-parallel
Strand 5
D
385 386parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 108first strand
Strand 2
C
277 282anti-parallel
Strand 3
C
263 266anti-parallel
Strand 4
C
235 239parallel
Strand 5
C
200 205parallel
Strand 6
C
130 134parallel
Strand 7
C
166 169parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 209first strand
Strand 2
C
215 216anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
345 351first strand
Strand 2
C
354 359anti-parallel
Strand 3
C
396 399anti-parallel
Strand 4
C
388 390anti-parallel
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There are 7 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
103 108first strand
Strand 2
D
277 282anti-parallel
Strand 3
D
263 266anti-parallel
Strand 4
D
235 239parallel
Strand 5
D
200 205parallel
Strand 6
D
130 134parallel
Strand 7
D
166 169parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
208 209first strand
Strand 2
D
215 216anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
345 351first strand
Strand 2
D
354 359anti-parallel
Strand 3
D
396 399anti-parallel
Strand 4
D
388 390anti-parallel
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