Analysis of interatomic Contacts of Structural Units in PDB entry:
1T30


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T30 entry

There are 2 chains in PDB entry 1T30 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 300
B
 LEU 174ARG 429
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1T30. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 58Right-handed alpha
Helix 2
2
A
87 94Right-handed alpha
Helix 3
3
A
100 121Right-handed alpha
Helix 4
4
A
159 163Right-handed 310
Helix 5
5
A
170 175Right-handed alpha
Helix 6
6
A
183 199Right-handed alpha
Helix 7
7
A
207 217Right-handed alpha
Helix 8
8
A
223 227Right-handed 310
Helix 9
9
A
247 252Right-handed alpha
Helix 10
10
A
259 266Right-handed alpha
Helix 11
11
A
275 282Right-handed alpha
Helix 12
12
B
175 193Right-handed alpha
Helix 13
13
B
196 202Right-handed 310
Helix 14
14
B
206 225Right-handed alpha
Helix 15
15
B
227 244Right-handed alpha
Helix 16
16
B
248 264Right-handed alpha
Helix 17
17
B
265 267Right-handed 310
Helix 18
18
B
271 279Right-handed alpha
Helix 19
19
B
284 299Right-handed alpha
Helix 20
20
B
307 318Right-handed alpha
Helix 21
21
B
325 339Right-handed alpha
Helix 22
22
B
348 366Right-handed alpha
Helix 23
23
B
378 395Right-handed alpha
Helix 24
24
B
404 412Right-handed alpha
Helix 25
25
B
413 416Right-handed 310
Helix 26
26
B
417 421Right-handed 310
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There are 3 sheets in PDB entry 1T30. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 12first strand
Strand 2
A
16 22anti-parallel
Strand 3
A
30 36anti-parallel
Strand 4
A
75 81anti-parallel
Strand 5
A
70 71anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 86first strand
Strand 2
A
133 135anti-parallel
Strand 3
A
141 143anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 124first strand
Strand 2
A
150 151anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il