Analysis of interatomic Contacts of Structural Units in PDB entry:
1T35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T35 entry

There are 8 chains in PDB entry 1T35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1TYR 179
B
 MSE 1TYR 179
C
 MSE 1TYR 179
D
 MSE 1TYR 179
E
 MSE 1LEU 184
F
 MSE 1LEU 184
G
 MSE 1TYR 179
H
 MSE 1TYR 179
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 1T35. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 32Right-handed alpha
Helix 2
2
A
43 55Right-handed alpha
Helix 3
3
A
69 74Right-handed alpha
Helix 4
4
A
85 98Right-handed alpha
Helix 5
5
A
107 120Right-handed alpha
Helix 6
6
A
135 138Right-handed 310
Helix 7
7
A
139 152Right-handed alpha
Helix 8
8
A
158 162Right-handed alpha
Helix 9
9
A
168 178Right-handed alpha
Helix 10
10
B
15 32Right-handed alpha
Helix 11
11
B
43 56Right-handed alpha
Helix 12
12
B
70 75Right-handed alpha
Helix 13
13
B
85 97Right-handed alpha
Helix 14
14
B
107 121Right-handed alpha
Helix 15
15
B
135 138Right-handed 310
Helix 16
16
B
139 152Right-handed alpha
Helix 17
17
B
156 161Right-handed 310
Helix 18
18
B
168 177Right-handed alpha
Helix 19
19
C
15 32Right-handed alpha
Helix 20
20
C
43 55Right-handed alpha
Helix 21
21
C
69 73Right-handed 310
Helix 22
22
C
86 98Right-handed alpha
Helix 23
23
C
107 120Right-handed alpha
Helix 24
24
C
134 138Right-handed 310
Helix 25
25
C
139 151Right-handed alpha
Helix 26
26
C
159 163Right-handed 310
Helix 27
27
C
168 176Right-handed alpha
Helix 28
28
D
16 32Right-handed alpha
Helix 29
29
D
43 55Right-handed alpha
Helix 30
30
D
69 73Right-handed 310
Helix 31
31
D
85 96Right-handed alpha
Helix 32
32
D
107 121Right-handed alpha
Helix 33
33
D
139 153Right-handed alpha
Helix 34
34
D
157 162Right-handed 310
Helix 35
35
D
168 178Right-handed alpha
Helix 36
36
E
16 32Right-handed alpha
Helix 37
37
E
43 55Right-handed alpha
Helix 38
38
E
85 98Right-handed alpha
Helix 39
39
E
107 121Right-handed alpha
Helix 40
40
E
139 152Right-handed alpha
Helix 41
41
E
156 161Right-handed 310
Helix 42
42
E
168 180Right-handed alpha
Helix 43
43
F
16 31Right-handed alpha
Helix 44
44
F
44 55Right-handed alpha
Helix 45
45
F
69 73Right-handed 310
Helix 46
46
F
86 97Right-handed alpha
Helix 47
47
F
107 121Right-handed alpha
Helix 48
48
F
134 138Right-handed 310
Helix 49
49
F
139 152Right-handed alpha
Helix 50
50
F
156 161Right-handed 310
Helix 51
51
F
168 177Right-handed alpha
Helix 52
52
G
15 32Right-handed alpha
Helix 53
53
G
44 55Right-handed alpha
Helix 54
54
G
69 73Right-handed 310
Helix 55
55
G
87 98Right-handed alpha
Helix 56
56
G
107 120Right-handed alpha
Helix 57
57
G
139 152Right-handed alpha
Helix 58
58
G
156 161Right-handed 310
Helix 59
59
G
168 178Right-handed alpha
Helix 60
60
H
15 33Right-handed alpha
Helix 61
61
H
44 55Right-handed alpha
Helix 62
62
H
69 77Right-handed 310
Helix 63
63
H
86 98Right-handed alpha
Helix 64
64
H
107 119Right-handed alpha
Helix 65
65
H
135 138Right-handed 310
Helix 66
66
H
139 151Right-handed alpha
Helix 67
67
H
156 160Right-handed 310
Helix 68
68
H
168 175Right-handed alpha
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There are 8 sheets in PDB entry 1T35. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 84first strand
Strand 2
A
60 65parallel
Strand 3
A
35 38parallel
Strand 4
A
3 7parallel
Strand 5
A
100 103parallel
Strand 6
A
130 133parallel
Strand 7
A
163 166parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 84first strand
Strand 2
B
60 65parallel
Strand 3
B
35 38parallel
Strand 4
B
3 7parallel
Strand 5
B
100 103parallel
Strand 6
B
130 133parallel
Strand 7
B
163 166parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 84first strand
Strand 2
C
60 65parallel
Strand 3
C
35 38parallel
Strand 4
C
3 7parallel
Strand 5
C
100 103parallel
Strand 6
C
130 132parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
80 84first strand
Strand 2
D
60 65parallel
Strand 3
D
35 38parallel
Strand 4
D
3 7parallel
Strand 5
D
101 103parallel
Strand 6
D
130 132parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
80 84first strand
Strand 2
E
60 65parallel
Strand 3
E
35 38parallel
Strand 4
E
3 7parallel
Strand 5
E
100 103parallel
Strand 6
E
130 133parallel
Strand 7
E
163 166parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
80 84first strand
Strand 2
F
60 65parallel
Strand 3
F
35 38parallel
Strand 4
F
3 7parallel
Strand 5
F
100 103parallel
Strand 6
F
130 132parallel
Strand 7
F
163 165parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
80 84first strand
Strand 2
G
60 65parallel
Strand 3
G
35 38parallel
Strand 4
G
3 7parallel
Strand 5
G
100 103parallel
Strand 6
G
130 133parallel
Strand 7
G
163 166parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
80 84first strand
Strand 2
H
60 65parallel
Strand 3
H
35 38parallel
Strand 4
H
3 7parallel
Strand 5
H
100 103parallel
Strand 6
H
130 133parallel
Strand 7
H
163 166parallel
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