Analysis of interatomic Contacts of Structural Units in PDB entry:
1T3G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T3G entry

There are 2 chains in PDB entry 1T3G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 403PHE 561
B
 LYS 403PHE 561
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1T3G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
425 432Right-handed alpha
Helix 2
2
A
432 441Right-handed alpha
Helix 3
3
A
448 453Right-handed alpha
Helix 4
4
A
458 469Right-handed alpha
Helix 5
5
A
478 484Right-handed alpha
Helix 6
6
A
487 493Right-handed alpha
Helix 7
7
A
493 502Right-handed alpha
Helix 8
8
A
517 530Right-handed alpha
Helix 9
9
A
541 546Right-handed 310
Helix 10
10
A
549 559Right-handed alpha
Helix 11
11
B
424 432Right-handed alpha
Helix 12
12
B
432 441Right-handed alpha
Helix 13
13
B
448 453Right-handed alpha
Helix 14
14
B
458 469Right-handed alpha
Helix 15
15
B
478 485Right-handed alpha
Helix 16
16
B
487 493Right-handed alpha
Helix 17
17
B
493 503Right-handed alpha
Helix 18
18
B
517 529Right-handed alpha
Helix 19
19
B
541 546Right-handed 310
Helix 20
20
B
549 559Right-handed alpha
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There are 2 sheets in PDB entry 1T3G. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 447first strand
Strand 2
A
407 410parallel
Strand 3
A
472 477parallel
Strand 4
A
506 511parallel
Strand 5
A
534 538parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
446 447first strand
Strand 2
B
407 410parallel
Strand 3
B
473 477parallel
Strand 4
B
507 511parallel
Strand 5
B
534 538parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il