Analysis of interatomic Contacts of Structural Units in PDB entry:
1T5E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1T5E entry

There are 13 chains in PDB entry 1T5E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 29	LEU 259
B	THR 29	LEU 259
C	THR 29	LEU 259
D	THR 29	LEU 259
E	THR 29	LEU 259
F	THR 29	LEU 259
G	THR 29	LEU 259
H	THR 29	LEU 259
I	THR 29	LEU 259
J	THR 29	LEU 259
K	THR 29	LEU 259
L	THR 29	LEU 259
M	THR 29	LEU 259

There are 53 helices in PDB entry 1T5E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	73	103	Right-handed alpha
Helix 2	2	A	107	134	Right-handed alpha
Helix 3	3	A	180	193	Right-handed alpha
Helix 4	4	A	244	248	Right-handed 310
Helix 5	5	B	73	103	Right-handed alpha
Helix 6	6	B	107	134	Right-handed alpha
Helix 7	7	B	180	193	Right-handed alpha
Helix 8	8	B	244	248	Right-handed 310
Helix 9	9	C	73	101	Right-handed alpha
Helix 10	10	C	102	104	Right-handed 310
Helix 11	11	C	107	135	Right-handed alpha
Helix 12	12	C	180	193	Right-handed alpha
Helix 13	13	C	244	248	Right-handed 310
Helix 14	14	D	73	100	Right-handed alpha
Helix 15	15	D	109	135	Right-handed alpha
Helix 16	16	D	180	193	Right-handed alpha
Helix 17	17	D	244	248	Right-handed 310
Helix 18	18	E	73	101	Right-handed alpha
Helix 19	19	E	102	104	Right-handed 310
Helix 20	20	E	107	135	Right-handed alpha
Helix 21	21	E	180	193	Right-handed alpha
Helix 22	22	E	244	248	Right-handed 310
Helix 23	23	F	73	102	Right-handed alpha
Helix 24	24	F	107	134	Right-handed alpha
Helix 25	25	F	180	193	Right-handed alpha
Helix 26	26	F	244	248	Right-handed 310
Helix 27	27	G	73	102	Right-handed alpha
Helix 28	28	G	107	134	Right-handed alpha
Helix 29	29	G	180	193	Right-handed alpha
Helix 30	30	G	244	248	Right-handed 310
Helix 31	31	H	73	103	Right-handed alpha
Helix 32	32	H	109	135	Right-handed alpha
Helix 33	33	H	180	193	Right-handed alpha
Helix 34	34	H	244	248	Right-handed 310
Helix 35	35	I	73	102	Right-handed alpha
Helix 36	36	I	107	135	Right-handed alpha
Helix 37	37	I	180	193	Right-handed alpha
Helix 38	38	I	244	248	Right-handed 310
Helix 39	39	J	73	103	Right-handed alpha
Helix 40	40	J	107	135	Right-handed alpha
Helix 41	41	J	180	193	Right-handed alpha
Helix 42	42	K	73	102	Right-handed alpha
Helix 43	43	K	107	135	Right-handed alpha
Helix 44	44	K	180	193	Right-handed alpha
Helix 45	45	K	244	248	Right-handed 310
Helix 46	46	L	73	102	Right-handed alpha
Helix 47	47	L	107	134	Right-handed alpha
Helix 48	48	L	180	193	Right-handed alpha
Helix 49	49	L	244	248	Right-handed 310
Helix 50	50	M	73	101	Right-handed alpha
Helix 51	51	M	107	135	Right-handed alpha
Helix 52	52	M	180	193	Right-handed alpha
Helix 53	53	M	244	248	Right-handed 310

There are 53 sheets in PDB entry 1T5E. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	228	229	first strand
Strand 2	A	236	242	anti-parallel
Strand 3	A	215	222	anti-parallel
Strand 4	A	206	209	anti-parallel
Strand 5	A	254	258	anti-parallel
Strand 6	A	30	36	anti-parallel
Strand 7	A	173	179	anti-parallel
Strand 8	A	236	242	anti-parallel

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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	43	first strand
Strand 2	A	165	169	anti-parallel
Strand 3	A	143	145	anti-parallel
Strand 4	A	61	62	anti-parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	138	first strand
Strand 2	A	67	71	anti-parallel
Strand 3	A	49	53	anti-parallel
Strand 4	A	155	156	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	198	200	first strand
Strand 2	A	203	204	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	200	first strand
Strand 2	B	203	209	anti-parallel
Strand 3	B	215	223	anti-parallel
Strand 4	B	236	242	anti-parallel
Strand 5	B	228	229	anti-parallel

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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	198	200	first strand
Strand 2	B	203	209	anti-parallel
Strand 3	B	254	258	anti-parallel
Strand 4	B	30	36	anti-parallel
Strand 5	B	173	179	anti-parallel
Strand 6	B	236	242	anti-parallel
Strand 7	B	228	229	anti-parallel

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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	43	first strand
Strand 2	B	165	169	anti-parallel
Strand 3	B	143	148	anti-parallel
Strand 4	B	61	62	anti-parallel

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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	138	first strand
Strand 2	B	67	71	anti-parallel
Strand 3	B	49	54	anti-parallel
Strand 4	B	155	156	anti-parallel

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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	200	first strand
Strand 2	C	203	209	anti-parallel
Strand 3	C	215	223	anti-parallel
Strand 4	C	236	242	anti-parallel
Strand 5	C	228	229	anti-parallel

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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	200	first strand
Strand 2	C	203	209	anti-parallel
Strand 3	C	254	258	anti-parallel
Strand 4	C	30	36	anti-parallel
Strand 5	C	173	179	anti-parallel
Strand 6	C	236	242	anti-parallel
Strand 7	C	228	229	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	39	43	first strand
Strand 2	C	165	169	anti-parallel
Strand 3	C	143	145	anti-parallel
Strand 4	C	61	62	anti-parallel

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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	138	first strand
Strand 2	C	67	71	anti-parallel
Strand 3	C	49	53	anti-parallel
Strand 4	C	155	156	anti-parallel

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There are 8 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	228	229	first strand
Strand 2	D	236	242	anti-parallel
Strand 3	D	215	222	anti-parallel
Strand 4	D	206	209	anti-parallel
Strand 5	D	254	258	anti-parallel
Strand 6	D	30	36	anti-parallel
Strand 7	D	173	179	anti-parallel
Strand 8	D	236	242	anti-parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	39	43	first strand
Strand 2	D	165	169	anti-parallel
Strand 3	D	144	145	anti-parallel

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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	70	71	first strand
Strand 2	D	49	53	anti-parallel
Strand 3	D	155	156	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	200	first strand
Strand 2	D	203	204	anti-parallel

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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	198	200	first strand
Strand 2	E	203	209	anti-parallel
Strand 3	E	215	223	anti-parallel
Strand 4	E	236	242	anti-parallel
Strand 5	E	228	229	anti-parallel

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There are 7 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	198	200	first strand
Strand 2	E	203	209	anti-parallel
Strand 3	E	254	258	anti-parallel
Strand 4	E	30	36	anti-parallel
Strand 5	E	173	179	anti-parallel
Strand 6	E	236	242	anti-parallel
Strand 7	E	228	229	anti-parallel

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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	39	43	first strand
Strand 2	E	165	169	anti-parallel
Strand 3	E	143	145	anti-parallel
Strand 4	E	61	62	anti-parallel

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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	136	138	first strand
Strand 2	E	67	71	anti-parallel
Strand 3	E	49	54	anti-parallel
Strand 4	E	155	156	anti-parallel

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There are 5 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	198	200	first strand
Strand 2	F	203	209	anti-parallel
Strand 3	F	215	223	anti-parallel
Strand 4	F	236	242	anti-parallel
Strand 5	F	228	229	anti-parallel

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There are 7 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	198	200	first strand
Strand 2	F	203	209	anti-parallel
Strand 3	F	254	258	anti-parallel
Strand 4	F	30	36	anti-parallel
Strand 5	F	173	179	anti-parallel
Strand 6	F	236	242	anti-parallel
Strand 7	F	228	229	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	39	43	first strand
Strand 2	F	165	169	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	70	71	first strand
Strand 2	F	49	53	anti-parallel
Strand 3	F	155	156	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	61	62	first strand
Strand 2	F	143	144	anti-parallel

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There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	198	200	first strand
Strand 2	G	203	209	anti-parallel
Strand 3	G	215	223	anti-parallel
Strand 4	G	236	242	anti-parallel
Strand 5	G	228	229	anti-parallel

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There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	198	200	first strand
Strand 2	G	203	209	anti-parallel
Strand 3	G	254	258	anti-parallel
Strand 4	G	30	36	anti-parallel
Strand 5	G	173	179	anti-parallel
Strand 6	G	236	242	anti-parallel
Strand 7	G	228	229	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	39	43	first strand
Strand 2	G	165	169	anti-parallel
Strand 3	G	143	145	anti-parallel
Strand 4	G	61	62	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	70	71	first strand
Strand 2	G	49	53	anti-parallel
Strand 3	G	155	156	anti-parallel

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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	198	200	first strand
Strand 2	H	203	209	anti-parallel
Strand 3	H	215	223	anti-parallel
Strand 4	H	236	242	anti-parallel
Strand 5	H	228	229	anti-parallel

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There are 7 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	198	200	first strand
Strand 2	H	203	209	anti-parallel
Strand 3	H	254	258	anti-parallel
Strand 4	H	30	36	anti-parallel
Strand 5	H	173	179	anti-parallel
Strand 6	H	236	242	anti-parallel
Strand 7	H	228	229	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	39	43	first strand
Strand 2	H	165	169	anti-parallel
Strand 3	H	143	145	anti-parallel
Strand 4	H	61	62	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	70	71	first strand
Strand 2	H	49	53	anti-parallel
Strand 3	H	155	156	anti-parallel

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There are 5 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	198	200	first strand
Strand 2	I	203	209	anti-parallel
Strand 3	I	215	223	anti-parallel
Strand 4	I	236	242	anti-parallel
Strand 5	I	228	229	anti-parallel

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There are 7 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	198	200	first strand
Strand 2	I	203	209	anti-parallel
Strand 3	I	254	258	anti-parallel
Strand 4	I	30	36	anti-parallel
Strand 5	I	173	179	anti-parallel
Strand 6	I	236	242	anti-parallel
Strand 7	I	228	229	anti-parallel

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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	39	43	first strand
Strand 2	I	165	169	anti-parallel
Strand 3	I	144	145	anti-parallel

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There are 4 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	136	138	first strand
Strand 2	I	67	71	anti-parallel
Strand 3	I	49	53	anti-parallel
Strand 4	I	155	156	anti-parallel

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There are 5 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	198	200	first strand
Strand 2	J	203	209	anti-parallel
Strand 3	J	215	223	anti-parallel
Strand 4	J	236	242	anti-parallel
Strand 5	J	228	229	anti-parallel

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There are 7 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	198	200	first strand
Strand 2	J	203	209	anti-parallel
Strand 3	J	254	258	anti-parallel
Strand 4	J	30	36	anti-parallel
Strand 5	J	173	179	anti-parallel
Strand 6	J	236	242	anti-parallel
Strand 7	J	228	229	anti-parallel

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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	39	43	first strand
Strand 2	J	165	169	anti-parallel
Strand 3	J	144	148	anti-parallel

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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	136	138	first strand
Strand 2	J	67	71	anti-parallel
Strand 3	J	49	53	anti-parallel
Strand 4	J	155	156	anti-parallel

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There are 5 strands in AP sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	198	200	first strand
Strand 2	K	203	209	anti-parallel
Strand 3	K	215	223	anti-parallel
Strand 4	K	236	242	anti-parallel
Strand 5	K	228	229	anti-parallel

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There are 7 strands in AQ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	198	200	first strand
Strand 2	K	203	209	anti-parallel
Strand 3	K	254	258	anti-parallel
Strand 4	K	30	36	anti-parallel
Strand 5	K	173	179	anti-parallel
Strand 6	K	236	242	anti-parallel
Strand 7	K	228	229	anti-parallel

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There are 2 strands in AR sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	39	43	first strand
Strand 2	K	165	169	anti-parallel

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There are 4 strands in AS sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	136	138	first strand
Strand 2	K	67	71	anti-parallel
Strand 3	K	49	53	anti-parallel
Strand 4	K	155	156	anti-parallel

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There are 5 strands in AT sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	198	200	first strand
Strand 2	L	203	209	anti-parallel
Strand 3	L	215	223	anti-parallel
Strand 4	L	236	242	anti-parallel
Strand 5	L	228	229	anti-parallel

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There are 7 strands in AU sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	198	200	first strand
Strand 2	L	203	209	anti-parallel
Strand 3	L	254	258	anti-parallel
Strand 4	L	30	36	anti-parallel
Strand 5	L	173	179	anti-parallel
Strand 6	L	236	242	anti-parallel
Strand 7	L	228	229	anti-parallel

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There are 4 strands in AV sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	39	43	first strand
Strand 2	L	165	169	anti-parallel
Strand 3	L	143	145	anti-parallel
Strand 4	L	61	62	anti-parallel

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There are 4 strands in AW sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	136	138	first strand
Strand 2	L	67	71	anti-parallel
Strand 3	L	49	53	anti-parallel
Strand 4	L	155	156	anti-parallel

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There are 8 strands in AX sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	228	229	first strand
Strand 2	M	236	242	anti-parallel
Strand 3	M	215	222	anti-parallel
Strand 4	M	206	209	anti-parallel
Strand 5	M	254	258	anti-parallel
Strand 6	M	30	36	anti-parallel
Strand 7	M	173	179	anti-parallel
Strand 8	M	236	242	anti-parallel

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There are 3 strands in AY sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	39	43	first strand
Strand 2	M	165	169	anti-parallel
Strand 3	M	144	145	anti-parallel

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There are 4 strands in AZ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	136	138	first strand
Strand 2	M	67	71	anti-parallel
Strand 3	M	49	54	anti-parallel
Strand 4	M	155	156	anti-parallel

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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	198	200	first strand
Strand 2	M	203	204	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1T5E

Analysis of interatomic Contacts of Structural Units in PDB entry:
1T5E