Analysis of interatomic Contacts of Structural Units in PDB entry:
1T5J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T5J entry

There is 1 chain in PDB entry 1T5J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1GLU 301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1T5J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 23Right-handed alpha
Helix 2
2
A
24 26Right-handed 310
Helix 3
3
A
29 37Right-handed alpha
Helix 4
4
A
60 72Right-handed alpha
Helix 5
5
A
79 92Right-handed alpha
Helix 6
6
A
99 109Right-handed alpha
Helix 7
7
A
124 127Right-handed 310
Helix 8
8
A
128 135Right-handed alpha
Helix 9
9
A
138 152Right-handed alpha
Helix 10
10
A
156 175Right-handed alpha
Helix 11
11
A
180 191Right-handed alpha
Helix 12
12
A
194 202Right-handed alpha
Helix 13
13
A
203 207Right-handed 310
Helix 14
14
A
209 218Right-handed alpha
Helix 15
15
A
222 237Right-handed alpha
Helix 16
16
A
239 249Right-handed alpha
Helix 17
17
A
253 270Right-handed alpha
Helix 18
18
A
271 274Right-handed 310
Helix 19
19
A
275 281Right-handed alpha
Helix 20
20
A
284 300Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1T5J.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 74first strand
Strand 2
A
77 78anti-parallel
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