Analysis of interatomic Contacts of Structural Units in PDB entry:
1T6C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T6C entry

There is 1 chain in PDB entry 1T6C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 7SER 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1T6C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
48 53Right-handed alpha
Helix 2
2
A
56 77Right-handed alpha
Helix 3
3
A
87 92Right-handed alpha
Helix 4
4
A
95 107Right-handed alpha
Helix 5
5
A
115 131Right-handed alpha
Helix 6
6
A
166 175Right-handed alpha
Helix 7
7
A
181 197Right-handed alpha
Helix 8
8
A
210 221Right-handed alpha
Helix 9
9
A
227 232Right-handed alpha
Helix 10
10
A
238 249Right-handed alpha
Helix 11
11
A
252 260Right-handed alpha
Helix 12
12
A
264 268Right-handed 310
Helix 13
13
A
270 286Right-handed alpha
Helix 14
14
A
296 311Right-handed alpha
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There are 2 sheets in PDB entry 1T6C. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 42first strand
Strand 2
A
20 29anti-parallel
Strand 3
A
9 16anti-parallel
Strand 4
A
81 86parallel
Strand 5
A
111 113parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 163first strand
Strand 2
A
146 153anti-parallel
Strand 3
A
136 143anti-parallel
Strand 4
A
205 209parallel
Strand 5
A
289 293parallel
Strand 6
A
235 237anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il