Analysis of interatomic Contacts of Structural Units in PDB entry:
1T6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T6G entry

There are 4 chains in PDB entry 1T6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1LEU 381
B
 LEU 1LEU 381
C
 ALA 2SER 183
D
 ALA 2SER 183
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1T6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 59Right-handed alpha
Helix 2
2
A
126 131Right-handed 310
Helix 3
3
A
149 159Right-handed alpha
Helix 4
4
A
185 190Right-handed alpha
Helix 5
5
A
244 261Right-handed alpha
Helix 6
6
A
286 288Right-handed 310
Helix 7
7
A
313 317Right-handed alpha
Helix 8
8
A
349 354Right-handed alpha
Helix 9
9
B
52 59Right-handed alpha
Helix 10
10
B
126 131Right-handed 310
Helix 11
11
B
149 159Right-handed alpha
Helix 12
12
B
185 190Right-handed alpha
Helix 13
13
B
244 261Right-handed alpha
Helix 14
14
B
286 288Right-handed 310
Helix 15
15
B
313 317Right-handed alpha
Helix 16
16
B
349 354Right-handed alpha
Helix 17
17
C
11 15Right-handed 310
Helix 18
18
C
144 153Right-handed alpha
Helix 19
19
C
154 156Right-handed 310
Helix 20
20
D
11 15Right-handed 310
Helix 21
21
D
144 153Right-handed alpha
Helix 22
22
D
154 156Right-handed 310
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There are 15 sheets in PDB entry 1T6G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 13 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 196first strand
Strand 2
A
366 371anti-parallel
Strand 3
A
356 361anti-parallel
Strand 4
A
163 167anti-parallel
Strand 5
A
174 178anti-parallel
Strand 6
A
3 9anti-parallel
Strand 7
A
96 107anti-parallel
Strand 8
A
112 124anti-parallel
Strand 9
A
35 37parallel
Strand 10
A
137 142anti-parallel
Strand 11
A
24 29parallel
Strand 12
A
16 21anti-parallel
Strand 13
A
3 9anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
232 234anti-parallel
Strand 3
A
346 348parallel
Strand 4
A
241 243anti-parallel
Strand 5
A
330 332parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
210 215anti-parallel
Strand 3
A
300 304anti-parallel
Strand 4
A
309 312anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 273first strand
Strand 2
A
282 284anti-parallel
Strand 3
A
325 328anti-parallel
Strand 4
A
318 322anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 291first strand
Strand 2
A
294 295anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 82first strand
Strand 2
B
95 107anti-parallel
Strand 3
B
3 9anti-parallel
Strand 4
B
174 178anti-parallel
Strand 5
B
163 167anti-parallel
Strand 6
B
356 361anti-parallel
Strand 7
B
366 371anti-parallel
Strand 8
B
194 196anti-parallel
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There are 13 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 82first strand
Strand 2
B
95 107anti-parallel
Strand 3
B
112 124anti-parallel
Strand 4
B
35 37parallel
Strand 5
B
137 142anti-parallel
Strand 6
B
24 29parallel
Strand 7
B
16 21anti-parallel
Strand 8
B
3 9anti-parallel
Strand 9
B
174 178anti-parallel
Strand 10
B
163 167anti-parallel
Strand 11
B
356 361anti-parallel
Strand 12
B
366 371anti-parallel
Strand 13
B
194 196anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 208first strand
Strand 2
B
232 234anti-parallel
Strand 3
B
346 348parallel
Strand 4
B
241 243anti-parallel
Strand 5
B
330 332parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
218 219first strand
Strand 2
B
210 215anti-parallel
Strand 3
B
300 304anti-parallel
Strand 4
B
309 312anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
272 273first strand
Strand 2
B
282 284anti-parallel
Strand 3
B
325 328anti-parallel
Strand 4
B
318 322anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
290 291first strand
Strand 2
B
294 295anti-parallel
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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 10first strand
Strand 2
C
38 44anti-parallel
Strand 3
C
162 182anti-parallel
Strand 4
C
63 73anti-parallel
Strand 5
C
78 86anti-parallel
Strand 6
C
125 134parallel
Strand 7
C
106 118anti-parallel
Strand 8
C
96 103anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
16 20first strand
Strand 2
C
25 34anti-parallel
Strand 3
C
162 182anti-parallel
Strand 4
C
52 59anti-parallel
Strand 5
C
140 143anti-parallel
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There are 8 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 10first strand
Strand 2
D
38 44anti-parallel
Strand 3
D
162 174anti-parallel
Strand 4
D
63 73anti-parallel
Strand 5
D
78 86anti-parallel
Strand 6
D
125 134parallel
Strand 7
D
106 118anti-parallel
Strand 8
D
96 103anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
16 20first strand
Strand 2
D
25 29anti-parallel
Strand 3
D
177 182anti-parallel
Strand 4
D
52 59anti-parallel
Strand 5
D
140 143anti-parallel
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