Analysis of interatomic Contacts of Structural Units in PDB entry:
1T6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T6L entry

There is 1 chain in PDB entry 1T6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 10GLU 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1T6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 27Right-handed alpha
Helix 2
2
A
27 33Right-handed alpha
Helix 3
3
A
90 94Right-handed alpha
Helix 4
4
A
149 161Right-handed alpha
Helix 5
5
A
223 234Right-handed alpha
Helix 6
6
A
235 237Right-handed 310
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There are 4 sheets in PDB entry 1T6L. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 70first strand
Strand 2
A
12 15anti-parallel
Strand 3
A
101 105anti-parallel
Strand 4
A
111 118anti-parallel
Strand 5
A
121 128anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 81first strand
Strand 2
A
39 43anti-parallel
Strand 3
A
47 54anti-parallel
Strand 4
A
57 63anti-parallel
Strand 5
A
261 268anti-parallel
Strand 6
A
250 257anti-parallel
Strand 7
A
240 246anti-parallel
Strand 8
A
144 148anti-parallel
Strand 9
A
209 211anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
88 89anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 203first strand
Strand 2
A
190 195anti-parallel
Strand 3
A
179 185anti-parallel
Strand 4
A
217 222anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il