Analysis of interatomic Contacts of Structural Units in PDB entry:
1T6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T6N entry

There are 2 chains in PDB entry 1T6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 45VAL 251
B
 SER 45VAL 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1T6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 63Right-handed alpha
Helix 2
2
A
69 81Right-handed alpha
Helix 3
3
A
94 107Right-handed alpha
Helix 4
4
A
122 137Right-handed alpha
Helix 5
5
A
153 164Right-handed alpha
Helix 6
6
A
172 182Right-handed alpha
Helix 7
7
A
197 203Right-handed alpha
Helix 8
8
A
204 217Right-handed alpha
Helix 9
9
A
235 241Right-handed alpha
Helix 10
10
B
53 63Right-handed alpha
Helix 11
11
B
69 80Right-handed alpha
Helix 12
12
B
94 107Right-handed alpha
Helix 13
13
B
122 137Right-handed alpha
Helix 14
14
B
153 164Right-handed alpha
Helix 15
15
B
172 182Right-handed alpha
Helix 16
16
B
197 204Right-handed alpha
Helix 17
17
B
204 217Right-handed alpha
Helix 18
18
B
235 241Right-handed alpha
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There are 2 sheets in PDB entry 1T6N. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 148first strand
Strand 2
A
168 171parallel
Strand 3
A
116 119parallel
Strand 4
A
192 196parallel
Strand 5
A
223 228parallel
Strand 6
A
85 88parallel
Strand 7
A
247 250parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 148first strand
Strand 2
B
168 171parallel
Strand 3
B
116 119parallel
Strand 4
B
192 196parallel
Strand 5
B
223 228parallel
Strand 6
B
85 88parallel
Strand 7
B
247 250parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il