Analysis of interatomic Contacts of Structural Units in PDB entry:
1T71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T71 entry

There is 1 chain in PDB entry 1T71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 1T71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 24Right-handed alpha
Helix 2
2
A
25 34Right-handed alpha
Helix 3
3
A
52 63Right-handed alpha
Helix 4
4
A
76 78Right-handed 310
Helix 5
5
A
79 84Right-handed alpha
Helix 6
6
A
136 146Right-handed alpha
Helix 7
7
A
161 173Right-handed alpha
Helix 8
8
A
218 227Right-handed alpha
Helix 9
9
A
269 273Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 1T71. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
66 68parallel
Strand 3
A
37 41parallel
Strand 4
A
6 10parallel
Strand 5
A
241 249anti-parallel
Strand 6
A
259 267anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 13first strand
Strand 2
A
206 207parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 112first strand
Strand 2
A
117 124anti-parallel
Strand 3
A
152 158parallel
Strand 4
A
178 182parallel
Strand 5
A
199 201parallel
Strand 6
A
192 193anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il