Analysis of interatomic Contacts of Structural Units in PDB entry:
1T7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T7P entry

There are 4 chains in PDB entry 1T7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
P
 G 12 A 21
T
 C 3 C 15
A
 MET 1HIS 704
B
 LYS 3LEU 107
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1T7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 14Right-handed 310
Helix 2
2
A
36 51Right-handed 310
Helix 3
3
A
65 76Right-handed alpha
Helix 4
4
A
85 87Right-handed 310
Helix 5
5
A
91 98Right-handed alpha
Helix 6
6
A
127 149Right-handed alpha
Helix 7
7
A
158 160Right-handed 310
Helix 8
8
A
165 186Right-handed alpha
Helix 9
9
A
203 209Right-handed alpha
Helix 10
10
A
212 230Right-handed alpha
Helix 11
11
A
236 260Right-handed alpha
Helix 12
12
A
340 347Right-handed alpha
Helix 13
13
A
366 371Right-handed alpha
Helix 14
14
A
377 399Right-handed alpha
Helix 15
15
A
406 409Right-handed alpha
Helix 16
16
A
448 454Right-handed alpha
Helix 17
17
A
457 459Right-handed 310
Helix 18
18
A
479 492Right-handed alpha
Helix 19
19
A
495 499Right-handed alpha
Helix 20
20
A
505 513Right-handed alpha
Helix 21
21
A
518 529Right-handed alpha
Helix 22
22
A
534 541Right-handed alpha
Helix 23
23
A
545 558Right-handed alpha
Helix 24
24
A
561 573Right-handed alpha
Helix 25
25
A
606 636Right-handed 310
Helix 26
26
A
663 683Right-handed alpha
Helix 27
27
B
9 15Right-handed alpha
Helix 28
28
B
33 48Right-handed alpha
Helix 29
29
B
68 70Right-handed 310
Helix 30
30
B
96 105Right-handed alpha
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There are 7 sheets in PDB entry 1T7P. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
18 25anti-parallel
Strand 3
A
2 8anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
88 90parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
264 267first strand
Strand 2
A
329 332anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 421first strand
Strand 2
A
431 433anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
692 697first strand
Strand 2
A
470 476anti-parallel
Strand 3
A
655 660anti-parallel
Strand 4
A
646 651anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 594first strand
Strand 2
A
600 602anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 59first strand
Strand 2
B
22 28parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
85 91anti-parallel
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