Analysis of interatomic Contacts of Structural Units in PDB entry:
1TAE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TAE entry

There are 4 chains in PDB entry 1TAE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4VAL 324
B
 GLN 4VAL 324
C
 GLN 4VAL 324
D
 GLN 4VAL 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 1TAE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 31Right-handed alpha
Helix 2
2
A
38 56Right-handed alpha
Helix 3
3
A
57 60Right-handed 310
Helix 4
4
A
64 68Right-handed 310
Helix 5
5
A
94 110Right-handed alpha
Helix 6
6
A
150 155Right-handed alpha
Helix 7
7
A
179 193Right-handed alpha
Helix 8
8
A
200 210Right-handed alpha
Helix 9
9
A
213 221Right-handed alpha
Helix 10
10
A
239 250Right-handed alpha
Helix 11
11
A
263 278Right-handed alpha
Helix 12
12
A
279 281Right-handed 310
Helix 13
13
A
294 302Right-handed alpha
Helix 14
14
A
318 323Right-handed 310
Helix 15
15
B
7 31Right-handed alpha
Helix 16
16
B
38 56Right-handed alpha
Helix 17
17
B
57 60Right-handed 310
Helix 18
18
B
94 109Right-handed alpha
Helix 19
19
B
150 155Right-handed alpha
Helix 20
20
B
179 193Right-handed alpha
Helix 21
21
B
200 210Right-handed alpha
Helix 22
22
B
213 218Right-handed alpha
Helix 23
23
B
239 251Right-handed alpha
Helix 24
24
B
263 278Right-handed alpha
Helix 25
25
B
279 281Right-handed 310
Helix 26
26
B
294 302Right-handed alpha
Helix 27
27
B
318 323Right-handed 310
Helix 28
28
C
7 31Right-handed alpha
Helix 29
29
C
38 56Right-handed alpha
Helix 30
30
C
57 60Right-handed 310
Helix 31
31
C
64 68Right-handed 310
Helix 32
32
C
94 110Right-handed alpha
Helix 33
33
C
150 155Right-handed alpha
Helix 34
34
C
179 191Right-handed alpha
Helix 35
35
C
200 210Right-handed alpha
Helix 36
36
C
213 221Right-handed alpha
Helix 37
37
C
239 251Right-handed alpha
Helix 38
38
C
263 277Right-handed alpha
Helix 39
39
C
278 281Right-handed 310
Helix 40
40
C
294 302Right-handed alpha
Helix 41
41
C
318 322Right-handed 310
Helix 42
42
D
7 31Right-handed alpha
Helix 43
43
D
38 56Right-handed alpha
Helix 44
44
D
57 60Right-handed 310
Helix 45
45
D
64 68Right-handed 310
Helix 46
46
D
94 110Right-handed alpha
Helix 47
47
D
150 155Right-handed alpha
Helix 48
48
D
179 192Right-handed alpha
Helix 49
49
D
200 210Right-handed alpha
Helix 50
50
D
213 221Right-handed alpha
Helix 51
51
D
239 250Right-handed alpha
Helix 52
52
D
263 278Right-handed alpha
Helix 53
53
D
279 281Right-handed 310
Helix 54
54
D
294 302Right-handed alpha
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There are 12 sheets in PDB entry 1TAE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 81first strand
Strand 2
A
146 148anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
311 315parallel
Strand 3
A
285 292anti-parallel
Strand 4
A
115 121anti-parallel
Strand 5
A
259 261anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 140first strand
Strand 2
A
124 131anti-parallel
Strand 3
A
170 177anti-parallel
Strand 4
A
223 231anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
79 81first strand
Strand 2
B
146 148anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
91 92first strand
Strand 2
B
311 315parallel
Strand 3
B
285 292anti-parallel
Strand 4
B
115 121anti-parallel
Strand 5
B
259 261anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 140first strand
Strand 2
B
124 131anti-parallel
Strand 3
B
170 177anti-parallel
Strand 4
B
223 231anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 81first strand
Strand 2
C
146 148anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
90 92first strand
Strand 2
C
311 315parallel
Strand 3
C
285 292anti-parallel
Strand 4
C
115 121anti-parallel
Strand 5
C
259 261anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
134 140first strand
Strand 2
C
124 131anti-parallel
Strand 3
C
170 177anti-parallel
Strand 4
C
223 231anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
78 81first strand
Strand 2
D
146 149anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
90 92first strand
Strand 2
D
311 315parallel
Strand 3
D
285 292anti-parallel
Strand 4
D
115 121anti-parallel
Strand 5
D
259 261anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
134 140first strand
Strand 2
D
124 131anti-parallel
Strand 3
D
170 177anti-parallel
Strand 4
D
223 231anti-parallel
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