Analysis of interatomic Contacts of Structural Units in PDB entry:
1TB3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TB3 entry

There are 8 chains in PDB entry 1TB3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1PHE 349
B
 PRO 1PHE 349
C
 PRO 1PHE 349
D
 PRO 1PHE 349
E
 PRO 1PHE 349
F
 PRO 1PHE 349
G
 PRO 1PHE 349
H
 PRO 1PHE 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are129 helices in PDB entry 1TB3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 15Right-handed alpha
Helix 2
2
A
17 26Right-handed alpha
Helix 3
3
A
31 44Right-handed alpha
Helix 4
4
A
79 83Right-handed 310
Helix 5
5
A
87 99Right-handed alpha
Helix 6
6
A
111 119Right-handed alpha
Helix 7
7
A
135 148Right-handed alpha
Helix 8
8
A
164 170Right-handed alpha
Helix 9
9
A
205 214Right-handed alpha
Helix 10
10
A
227 237Right-handed alpha
Helix 11
11
A
246 250Right-handed 310
Helix 12
12
A
257 270Right-handed alpha
Helix 13
13
A
283 293Right-handed alpha
Helix 14
14
A
301 335Right-handed alpha
Helix 15
15
A
338 342Right-handed 310
Helix 16
16
A
343 347Right-handed 310
Helix 17
17
B
4 15Right-handed alpha
Helix 18
18
B
17 26Right-handed alpha
Helix 19
19
B
31 44Right-handed alpha
Helix 20
20
B
79 83Right-handed 310
Helix 21
21
B
87 99Right-handed alpha
Helix 22
22
B
111 119Right-handed alpha
Helix 23
23
B
133 147Right-handed alpha
Helix 24
24
B
164 170Right-handed alpha
Helix 25
25
B
205 215Right-handed alpha
Helix 26
26
B
227 237Right-handed alpha
Helix 27
27
B
246 250Right-handed 310
Helix 28
28
B
257 270Right-handed alpha
Helix 29
29
B
283 293Right-handed alpha
Helix 30
30
B
301 335Right-handed alpha
Helix 31
31
B
338 342Right-handed 310
Helix 32
32
B
343 347Right-handed 310
Helix 33
33
C
4 15Right-handed alpha
Helix 34
34
C
17 26Right-handed alpha
Helix 35
35
C
31 44Right-handed alpha
Helix 36
36
C
79 83Right-handed 310
Helix 37
37
C
87 99Right-handed alpha
Helix 38
38
C
111 119Right-handed alpha
Helix 39
39
C
133 148Right-handed alpha
Helix 40
40
C
164 170Right-handed alpha
Helix 41
41
C
207 214Right-handed alpha
Helix 42
42
C
227 237Right-handed alpha
Helix 43
43
C
246 250Right-handed 310
Helix 44
44
C
257 270Right-handed alpha
Helix 45
45
C
283 293Right-handed alpha
Helix 46
46
C
301 335Right-handed alpha
Helix 47
47
C
338 342Right-handed 310
Helix 48
48
C
343 347Right-handed 310
Helix 49
49
D
4 15Right-handed alpha
Helix 50
50
D
17 26Right-handed alpha
Helix 51
51
D
31 44Right-handed alpha
Helix 52
52
D
79 83Right-handed 310
Helix 53
53
D
87 99Right-handed alpha
Helix 54
54
D
111 119Right-handed alpha
Helix 55
55
D
133 147Right-handed alpha
Helix 56
56
D
164 170Right-handed alpha
Helix 57
57
D
205 216Right-handed alpha
Helix 58
58
D
227 237Right-handed alpha
Helix 59
59
D
246 250Right-handed 310
Helix 60
60
D
257 270Right-handed alpha
Helix 61
61
D
283 293Right-handed alpha
Helix 62
62
D
301 335Right-handed alpha
Helix 63
63
D
338 342Right-handed 310
Helix 64
64
D
343 347Right-handed 310
Helix 65
65
E
4 15Right-handed alpha
Helix 66
66
E
17 26Right-handed alpha
Helix 67
67
E
31 44Right-handed alpha
Helix 68
68
E
79 83Right-handed 310
Helix 69
69
E
87 99Right-handed alpha
Helix 70
70
E
111 119Right-handed alpha
Helix 71
71
E
133 147Right-handed alpha
Helix 72
72
E
164 170Right-handed alpha
Helix 73
73
E
207 215Right-handed alpha
Helix 74
74
E
227 237Right-handed alpha
Helix 75
75
E
246 250Right-handed 310
Helix 76
76
E
257 270Right-handed alpha
Helix 77
77
E
283 293Right-handed alpha
Helix 78
78
E
301 335Right-handed alpha
Helix 79
79
E
338 342Right-handed 310
Helix 80
80
E
343 347Right-handed 310
Helix 81
81
F
4 16Right-handed alpha
Helix 82
82
F
17 26Right-handed alpha
Helix 83
83
F
31 44Right-handed alpha
Helix 84
84
F
79 83Right-handed 310
Helix 85
85
F
87 99Right-handed alpha
Helix 86
86
F
111 119Right-handed alpha
Helix 87
87
F
133 147Right-handed alpha
Helix 88
88
F
164 170Right-handed alpha
Helix 89
89
F
205 214Right-handed alpha
Helix 90
90
F
227 237Right-handed alpha
Helix 91
91
F
246 250Right-handed 310
Helix 92
92
F
257 270Right-handed alpha
Helix 93
93
F
283 293Right-handed alpha
Helix 94
94
F
301 312Right-handed alpha
Helix 95
95
F
312 335Right-handed alpha
Helix 96
96
F
338 342Right-handed 310
Helix 97
97
F
343 347Right-handed 310
Helix 98
98
G
4 15Right-handed alpha
Helix 99
99
G
17 26Right-handed alpha
Helix 100
100
G
31 44Right-handed alpha
Helix 101
101
G
79 83Right-handed 310
Helix 102
102
G
87 99Right-handed alpha
Helix 103
103
G
111 119Right-handed alpha
Helix 104
104
G
133 147Right-handed alpha
Helix 105
105
G
164 170Right-handed alpha
Helix 106
106
G
205 215Right-handed alpha
Helix 107
107
G
227 237Right-handed alpha
Helix 108
108
G
246 250Right-handed 310
Helix 109
109
G
257 270Right-handed alpha
Helix 110
110
G
283 293Right-handed alpha
Helix 111
111
G
301 335Right-handed alpha
Helix 112
112
G
338 342Right-handed 310
Helix 113
113
G
343 347Right-handed 310
Helix 114
114
H
4 15Right-handed alpha
Helix 115
115
H
17 26Right-handed alpha
Helix 116
116
H
31 44Right-handed alpha
Helix 117
117
H
79 83Right-handed 310
Helix 118
118
H
87 99Right-handed alpha
Helix 119
119
H
111 119Right-handed alpha
Helix 120
120
H
133 147Right-handed alpha
Helix 121
121
H
164 170Right-handed alpha
Helix 122
122
H
207 216Right-handed alpha
Helix 123
123
H
227 237Right-handed alpha
Helix 124
124
H
246 250Right-handed 310
Helix 125
125
H
257 270Right-handed alpha
Helix 126
126
H
283 293Right-handed alpha
Helix 127
127
H
301 335Right-handed alpha
Helix 128
128
H
338 342Right-handed 310
Helix 129
129
H
343 347Right-handed 310
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There are 16 sheets in PDB entry 1TB3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
66 68anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
102 104parallel
Strand 3
A
124 127parallel
Strand 4
A
152 155parallel
Strand 5
A
220 225parallel
Strand 6
A
241 244parallel
Strand 7
A
274 278parallel
Strand 8
A
298 300parallel
Strand 9
A
72 74parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
66 68anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 74first strand
Strand 2
B
102 104parallel
Strand 3
B
124 127parallel
Strand 4
B
152 155parallel
Strand 5
B
220 225parallel
Strand 6
B
241 244parallel
Strand 7
B
274 278parallel
Strand 8
B
298 300parallel
Strand 9
B
72 74parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 63first strand
Strand 2
C
66 68anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 74first strand
Strand 2
C
102 104parallel
Strand 3
C
124 127parallel
Strand 4
C
152 155parallel
Strand 5
C
220 225parallel
Strand 6
C
241 244parallel
Strand 7
C
274 278parallel
Strand 8
C
298 300parallel
Strand 9
C
72 74parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 63first strand
Strand 2
D
66 68anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
72 74first strand
Strand 2
D
102 104parallel
Strand 3
D
124 127parallel
Strand 4
D
152 155parallel
Strand 5
D
220 225parallel
Strand 6
D
241 244parallel
Strand 7
D
274 278parallel
Strand 8
D
298 300parallel
Strand 9
D
72 74parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
61 63first strand
Strand 2
E
66 68anti-parallel
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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
72 74first strand
Strand 2
E
102 104parallel
Strand 3
E
124 127parallel
Strand 4
E
152 155parallel
Strand 5
E
220 225parallel
Strand 6
E
241 244parallel
Strand 7
E
274 278parallel
Strand 8
E
298 300parallel
Strand 9
E
72 74parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
61 63first strand
Strand 2
F
66 68anti-parallel
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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
72 74first strand
Strand 2
F
102 104parallel
Strand 3
F
124 127parallel
Strand 4
F
152 155parallel
Strand 5
F
220 225parallel
Strand 6
F
241 244parallel
Strand 7
F
274 278parallel
Strand 8
F
298 300parallel
Strand 9
F
72 74parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
61 63first strand
Strand 2
G
66 68anti-parallel
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There are 9 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
72 74first strand
Strand 2
G
102 104parallel
Strand 3
G
124 127parallel
Strand 4
G
152 155parallel
Strand 5
G
220 225parallel
Strand 6
G
241 244parallel
Strand 7
G
274 278parallel
Strand 8
G
298 300parallel
Strand 9
G
72 74parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
61 63first strand
Strand 2
H
66 68anti-parallel
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There are 9 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
72 74first strand
Strand 2
H
102 104parallel
Strand 3
H
124 127parallel
Strand 4
H
152 155parallel
Strand 5
H
220 225parallel
Strand 6
H
241 244parallel
Strand 7
H
274 278parallel
Strand 8
H
298 300parallel
Strand 9
H
72 74parallel
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