Analysis of interatomic Contacts of Structural Units in PDB entry:
1TC2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TC2 entry

There are 2 chains in PDB entry 1TC2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 5TYR 190
B
 ARG 503GLN 698
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1TC2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 34Right-handed alpha
Helix 2
2
A
54 68Right-handed alpha
Helix 3
3
A
117 129Right-handed alpha
Helix 4
4
A
144 147Right-handed 310
Helix 5
5
B
514 534Right-handed alpha
Helix 6
6
B
535 537Right-handed 310
Helix 7
7
B
554 568Right-handed alpha
Helix 8
8
B
617 629Right-handed alpha
Helix 9
9
B
686 698Right-handed alpha
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There are 4 sheets in PDB entry 1TC2. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 13first strand
Strand 2
A
182 185anti-parallel
Strand 3
A
165 166anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 96first strand
Strand 2
A
72 80anti-parallel
Strand 3
A
45 50parallel
Strand 4
A
106 114parallel
Strand 5
A
134 142parallel
Strand 6
A
155 159parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
508 513first strand
Strand 2
B
682 685anti-parallel
Strand 3
B
665 666anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
593 596first strand
Strand 2
B
572 580anti-parallel
Strand 3
B
545 551parallel
Strand 4
B
606 614parallel
Strand 5
B
634 642parallel
Strand 6
B
655 659parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il