Analysis of interatomic Contacts of Structural Units in PDB entry:
1TD6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TD6 entry

There is 1 chain in PDB entry 1TD6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 5VAL 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1TD6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 34Right-handed alpha
Helix 2
2
A
39 57Right-handed alpha
Helix 3
3
A
59 71Right-handed alpha
Helix 4
4
A
77 100Right-handed alpha
Helix 5
5
A
101 106Right-handed 310
Helix 6
6
A
107 117Right-handed alpha
Helix 7
7
A
122 129Right-handed 310
Helix 8
8
A
138 144Right-handed 310
Helix 9
9
A
145 150Right-handed alpha
Helix 10
10
A
155 167Right-handed alpha
Helix 11
11
A
168 173Right-handed 310
Helix 12
12
A
200 218Right-handed alpha
Helix 13
13
A
221 239Right-handed alpha
Helix 14
14
A
247 263Right-handed alpha
Helix 15
15
A
271 282Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1TD6.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 181first strand
Strand 2
A
186 191anti-parallel
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