Analysis of interatomic Contacts of Structural Units in PDB entry:
1TE5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TE5 entry

There are 2 chains in PDB entry 1TE5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 3LYS 255
B
 CYS 3LYS 255
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1TE5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
59 68Right-handed alpha
Helix 2
2
A
88 92Right-handed 310
Helix 3
3
A
128 145Right-handed alpha
Helix 4
4
A
150 167Right-handed alpha
Helix 5
5
B
83 88Right-handed alpha
Helix 6
6
B
89 92Right-handed 310
Helix 7
7
B
128 145Right-handed alpha
Helix 8
8
B
150 166Right-handed alpha
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There are 6 sheets in PDB entry 1TE5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 52first strand
Strand 2
A
36 43anti-parallel
Strand 3
A
71 81anti-parallel
Strand 4
A
5 15anti-parallel
Strand 5
A
221 226anti-parallel
Strand 6
A
189 195anti-parallel
Strand 7
A
237 239anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 20first strand
Strand 2
A
208 212anti-parallel
Strand 3
A
201 204anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 99first strand
Strand 2
A
102 109anti-parallel
Strand 3
A
172 176anti-parallel
Strand 4
A
181 184anti-parallel
Strand 5
A
244 248anti-parallel
Strand 6
A
251 254anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 51first strand
Strand 2
B
38 43anti-parallel
Strand 3
B
66 78anti-parallel
Strand 4
B
5 20anti-parallel
Strand 5
B
209 212anti-parallel
Strand 6
B
201 204anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 51first strand
Strand 2
B
38 43anti-parallel
Strand 3
B
66 78anti-parallel
Strand 4
B
5 20anti-parallel
Strand 5
B
221 226anti-parallel
Strand 6
B
189 195anti-parallel
Strand 7
B
237 239anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 98first strand
Strand 2
B
103 109anti-parallel
Strand 3
B
172 176anti-parallel
Strand 4
B
180 184anti-parallel
Strand 5
B
244 248anti-parallel
Strand 6
B
251 254anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il