Analysis of interatomic Contacts of Structural Units in PDB entry:
1TEE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1TEE entry

There are 4 chains in PDB entry 1TEE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 22	ARG 393
B	THR 31	ARG 393
C	ALA 22	ARG 393
D	THR 31	ARG 393

There are 66 helices in PDB entry 1TEE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	49	58	Right-handed alpha
Helix 2	2	A	67	76	Right-handed alpha
Helix 3	3	A	89	96	Right-handed alpha
Helix 4	4	A	101	127	Right-handed alpha
Helix 5	5	A	131	133	Right-handed 310
Helix 6	6	A	150	159	Right-handed alpha
Helix 7	7	A	173	175	Right-handed 310
Helix 8	8	A	176	192	Right-handed alpha
Helix 9	9	A	205	209	Right-handed 310
Helix 10	10	A	214	224	Right-handed alpha
Helix 11	11	A	280	300	Right-handed alpha
Helix 12	12	A	303	307	Right-handed 310
Helix 13	13	A	316	328	Right-handed alpha
Helix 14	14	A	330	333	Right-handed 310
Helix 15	15	A	334	345	Right-handed alpha
Helix 16	16	A	348	362	Right-handed alpha
Helix 17	17	B	49	58	Right-handed alpha
Helix 18	18	B	67	76	Right-handed alpha
Helix 19	19	B	89	98	Right-handed alpha
Helix 20	20	B	101	127	Right-handed alpha
Helix 21	21	B	131	133	Right-handed 310
Helix 22	22	B	150	160	Right-handed alpha
Helix 23	23	B	173	175	Right-handed 310
Helix 24	24	B	176	192	Right-handed alpha
Helix 25	25	B	206	209	Right-handed 310
Helix 26	26	B	214	224	Right-handed alpha
Helix 27	27	B	280	299	Right-handed alpha
Helix 28	28	B	303	307	Right-handed 310
Helix 29	29	B	316	328	Right-handed alpha
Helix 30	30	B	330	333	Right-handed 310
Helix 31	31	B	334	345	Right-handed alpha
Helix 32	32	B	347	349	Right-handed 310
Helix 33	33	B	350	362	Right-handed alpha
Helix 34	34	C	49	58	Right-handed alpha
Helix 35	35	C	67	76	Right-handed alpha
Helix 36	36	C	89	96	Right-handed alpha
Helix 37	37	C	101	127	Right-handed alpha
Helix 38	38	C	131	133	Right-handed 310
Helix 39	39	C	150	159	Right-handed alpha
Helix 40	40	C	173	175	Right-handed 310
Helix 41	41	C	176	192	Right-handed alpha
Helix 42	42	C	205	209	Right-handed 310
Helix 43	43	C	214	224	Right-handed alpha
Helix 44	44	C	280	300	Right-handed alpha
Helix 45	45	C	303	307	Right-handed 310
Helix 46	46	C	316	328	Right-handed alpha
Helix 47	47	C	330	333	Right-handed 310
Helix 48	48	C	334	345	Right-handed alpha
Helix 49	49	C	348	362	Right-handed alpha
Helix 50	50	D	49	58	Right-handed alpha
Helix 51	51	D	67	76	Right-handed alpha
Helix 52	52	D	89	97	Right-handed alpha
Helix 53	53	D	101	127	Right-handed alpha
Helix 54	54	D	131	133	Right-handed 310
Helix 55	55	D	150	160	Right-handed alpha
Helix 56	56	D	173	175	Right-handed 310
Helix 57	57	D	176	192	Right-handed alpha
Helix 58	58	D	206	209	Right-handed 310
Helix 59	59	D	214	224	Right-handed alpha
Helix 60	60	D	280	299	Right-handed alpha
Helix 61	61	D	303	307	Right-handed 310
Helix 62	62	D	316	328	Right-handed alpha
Helix 63	63	D	330	333	Right-handed 310
Helix 64	64	D	334	345	Right-handed alpha
Helix 65	65	D	347	349	Right-handed 310
Helix 66	66	D	350	362	Right-handed alpha

There are 12 sheets in PDB entry 1TEE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	171	first strand
Strand 2	A	135	142	parallel
Strand 3	A	196	203	parallel
Strand 4	A	227	236	anti-parallel
Strand 5	A	32	41	anti-parallel
Strand 6	A	247	256	anti-parallel
Strand 7	A	382	390	anti-parallel
Strand 8	A	370	378	anti-parallel
Strand 9	A	309	312	parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	48	first strand
Strand 2	A	80	82	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	264	269	first strand
Strand 2	A	272	277	anti-parallel

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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	171	first strand
Strand 2	B	135	142	parallel
Strand 3	B	196	204	parallel
Strand 4	B	226	236	anti-parallel
Strand 5	B	32	41	anti-parallel
Strand 6	B	247	256	anti-parallel
Strand 7	B	382	390	anti-parallel
Strand 8	B	370	378	anti-parallel
Strand 9	B	309	312	parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	48	first strand
Strand 2	B	80	82	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	269	first strand
Strand 2	B	272	275	anti-parallel

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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	171	first strand
Strand 2	C	135	142	parallel
Strand 3	C	196	203	parallel
Strand 4	C	227	236	anti-parallel
Strand 5	C	32	41	anti-parallel
Strand 6	C	247	256	anti-parallel
Strand 7	C	382	390	anti-parallel
Strand 8	C	370	378	anti-parallel
Strand 9	C	309	312	parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	48	first strand
Strand 2	C	80	82	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	264	269	first strand
Strand 2	C	272	277	anti-parallel

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There are 9 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	171	first strand
Strand 2	D	135	142	parallel
Strand 3	D	196	204	parallel
Strand 4	D	226	236	anti-parallel
Strand 5	D	32	41	anti-parallel
Strand 6	D	247	256	anti-parallel
Strand 7	D	382	390	anti-parallel
Strand 8	D	370	378	anti-parallel
Strand 9	D	309	312	parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	48	first strand
Strand 2	D	80	82	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	266	269	first strand
Strand 2	D	272	275	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1TEE

Analysis of interatomic Contacts of Structural Units in PDB entry:
1TEE