Analysis of interatomic Contacts of Structural Units in PDB entry:
1TFV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TFV entry

There is 1 chain in PDB entry 1TFV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 1VAL 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1TFV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 14Right-handed 310
Helix 2
2
A
15 19Right-handed 310
Helix 3
3
A
51 59Right-handed alpha
Helix 4
4
A
61 66Right-handed alpha
Helix 5
5
A
81 89Right-handed alpha
Helix 6
6
A
91 110Right-handed alpha
Helix 7
7
A
125 144Right-handed alpha
Helix 8
8
A
145 147Right-handed 310
Helix 9
9
A
160 168Right-handed alpha
Helix 10
10
A
169 174Right-handed alpha
Helix 11
11
A
214 226Right-handed alpha
Helix 12
12
A
228 230Right-handed 310
Helix 13
13
A
274 281Right-handed alpha
Helix 14
14
A
308 322Right-handed alpha
Helix 15
15
A
331 335Right-handed 310
Helix 16
16
A
348 360Right-handed alpha
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There are 4 sheets in PDB entry 1TFV. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 8first strand
Strand 2
A
32 36parallel
Strand 3
A
70 76parallel
Strand 4
A
113 117parallel
Strand 5
A
152 157parallel
Strand 6
A
180 182parallel
Strand 7
A
232 236parallel
Strand 8
A
326 329parallel
Strand 9
A
2 8parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
44 46anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 258first strand
Strand 2
A
239 245anti-parallel
Strand 3
A
271 273anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 258first strand
Strand 2
A
239 245anti-parallel
Strand 3
A
302 305anti-parallel
Strand 4
A
294 299anti-parallel
Strand 5
A
285 289anti-parallel
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