Analysis of interatomic Contacts of Structural Units in PDB entry:
1THG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1THG entry

There is 1 chain in PDB entry 1THG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLY 544
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1THG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
FL1
A
66 77Right-handed alpha
Helix 2
FL2
A
85 95Right-handed alpha
Helix 3
HFA
A
144 152Right-handed alpha
Helix 4
B3A
A
175 180Right-handed alpha
Helix 5
HFB
A
185 200Right-handed alpha
Helix 6
HFC
A
218 227Right-handed alpha
Helix 7
B6A
A
266 274Right-handed alpha
Helix 8
B6B
A
282 291Right-handed alpha
Helix 9
B6C
A
294 308Right-handed alpha
Helix 10
HFD
A
332 337Right-handed alpha
Helix 11
B7A
A
356 360Right-handed alpha
Helix 12
B7B
A
368 378Right-handed alpha
Helix 13
B7C
A
384 393Right-handed alpha
Helix 14
HFE
A
416 438Right-handed alpha
Helix 15
B8A
A
467 471Right-handed alpha
Helix 16
HFF
A
478 491Right-handed alpha
Helix 17
BCT
A
530 538Right-handed alpha
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There are 2 sheets in PDB entry 1THG. Click on sheet of interest to get list of strands forming it: BEN, BEC,

There are 3 strands in BEN sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
11 14anti-parallel
Strand 3
A
51 54parallel
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There are 11 strands in BEC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
21 28anti-parallel
Strand 3
A
107 113anti-parallel
Strand 4
A
158 162anti-parallel
Strand 5
A
123 128parallel
Strand 6
A
210 216parallel
Strand 7
A
244 248parallel
Strand 8
A
345 351parallel
Strand 9
A
443 449parallel
Strand 10
A
513 516parallel
Strand 11
A
521 525anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il