Analysis of interatomic Contacts of Structural Units in PDB entry:
1THM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1THM entry

There is 1 chain in PDB entry 1THM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 1TYR 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1THM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
A
14 17Right-handed alpha
Helix 2
H2
A
20 24Right-handed alpha
Helix 3
H3
A
71 79Right-handed alpha
Helix 4
H4
A
112 124Right-handed alpha
Helix 5
H5
A
141 152Right-handed alpha
Helix 6
H6
A
224 239Right-handed alpha
Helix 7
H7
A
245 254Right-handed alpha
Helix 8
H8
A
273 278Right-handed alpha
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There are 2 sheets in PDB entry 1THM. Click on sheet of interest to get list of strands forming it: S1, S2,

There are 10 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 62first strand
Strand 2
A
54 58anti-parallel
Strand 3
A
97 103parallel
Strand 4
A
32 38parallel
Strand 5
A
128 132parallel
Strand 6
A
156 161parallel
Strand 7
A
177 184parallel
Strand 8
A
202 206parallel
Strand 9
A
269 271parallel
Strand 10
A
257 257anti-parallel
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There are 2 strands in S2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 213first strand
Strand 2
A
217 221anti-parallel
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